| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnec_0978 |
|---|
| Symbol | |
|---|
| ID | 6182856 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Polynucleobacter necessarius subsp. necessarius STIR1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010531 |
|---|
| Strand | - |
|---|
| Start bp | 849325 |
|---|
| End bp | 850296 |
|---|
| Gene Length | 972 bp |
|---|
| Protein Length | 323 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 46% |
|---|
| IMG OID | 641671598 |
|---|
| Product | acetyl-CoA carboxylase carboxyltransferase subunit alpha |
|---|
| Protein accession | YP_001797777 |
|---|
| Protein GI | 171463664 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG0825] Acetyl-CoA carboxylase alpha subunit |
|---|
| TIGRFAM ID | [TIGR00513] acetyl-CoA carboxylase, carboxyl transferase, alpha subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 35 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 74 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAAACGA CTTTCCTGGA TTTTGAGCAG CAAATCGCCG AATTAGAGTC AAAGATTGAA
GAGCTGCGTT TTGTACAAGA TGAGTCATCG GTAGATATCT CCGATGAGAT CAAAATGCTT
GCTGAAAAAA GTCTGCAGCT AACAAAGGAT GTGTATGCCA ATCTCACTCC TTGGCAAGTG
TCTCAAGTGG CACGTCATCC ACAACGTCCT TACACCTTGG ATTACGTTGG CGCATTATTT
ACTGACTTTC ATGAGTTGCA TGGTGATCGT ACATTTGCGG ATGATCAATC CATCATCGGC
GGACTTGCTC GATTTGAGAA TCAGCCGTGT ATGGTAATCG GTCATCAAAA GGGTCGCGAC
ACGAAAGAGC GTGCTTTGCG CAACTTCGGT ATGAGCCGTC CTGAGGGTTA TCGCAAAGCA
ATGCGCCTTA TGCGTCTTGC CGAAAAATTC GGCATCCCTG TTTTTACTTT TGTAGATACA
CCAGGTGCAT TTCCGGGTAT TGATGCTGAA GAGCGCAATC AGTCGGAGGC GATTGGTCGC
AATTTATATG TACAAGCAGA ACTTGAAGTG CCAATCATCG CTACGATCAT TGGTGAAGGT
GGATCTGGTG GCGCCTTGGC TATTGCGATG GGTGATGCAG TGTTAATGTT ACAGAACTCC
ACTTACTCCG TTATCTCGCC TGAGGGTTGC GCTTCTATCC TTTGGAAGAC CGCTGATAAA
GCGTCTGAAG CCGCTGAGCA ATTAGGTCTC ACGGCTCAGC GTTTAAAAGC TTTAGGTCTA
ATCGACAAGA TTGTGGCAGA ACCGATTGGT GGGGCACATC GTGATTACGA CGGCATGATG
AGCAATATGC GCAAAGCTCT GGCTGAATCT TTAAAAACTT TTGATGGCAT GAAAGTAGAT
GCATTACTTG ATCGCCGTCA TGAGCGTTTG ATGAGCTATG GCAAGTTCAA GGAAATCACA
GCAAAGTCCT AA
|
|---|
| Protein sequence | MKTTFLDFEQ QIAELESKIE ELRFVQDESS VDISDEIKML AEKSLQLTKD VYANLTPWQV
SQVARHPQRP YTLDYVGALF TDFHELHGDR TFADDQSIIG GLARFENQPC MVIGHQKGRD
TKERALRNFG MSRPEGYRKA MRLMRLAEKF GIPVFTFVDT PGAFPGIDAE ERNQSEAIGR
NLYVQAELEV PIIATIIGEG GSGGALAIAM GDAVLMLQNS TYSVISPEGC ASILWKTADK
ASEAAEQLGL TAQRLKALGL IDKIVAEPIG GAHRDYDGMM SNMRKALAES LKTFDGMKVD
ALLDRRHERL MSYGKFKEIT AKS
|
|---|
| |