| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnec_0963 |
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| Symbol | |
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| ID | 6183646 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polynucleobacter necessarius subsp. necessarius STIR1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010531 |
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| Strand | + |
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| Start bp | 837848 |
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| End bp | 840289 |
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| Gene Length | 2442 bp |
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| Protein Length | 813 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 641671584 |
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| Product | 3-hydroxyacyl-CoA dehydrogenase NAD-binding |
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| Protein accession | YP_001797764 |
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| Protein GI | 171463651 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1024] Enoyl-CoA hydratase/carnithine racemase
[COG1250] 3-hydroxyacyl-CoA dehydrogenase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 79 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTGAAA ACAAGATTAT TAAGAAAGTA GCAATTTTAG GTGCCGGCGT CATGGGTGCG
CAAATTGCTG CTCAATGCAT TAATGTGGGA CTACCGGTTG TGCTATTTGA CCTACCTGGT
AAATCGGATG ACGGCAAGCC AGTACATAAA AATGCTATTG CCATCAAAGC AATCGAAAAC
CTCAAGAAAC TCAAACCCGC CCCACTAGGG CTTGCGAGCG AGGCCAATCT GATTCAGGCG
GCTAACTATG AAGATGACTT GGGCATGCTT ACAGAATGCG ATTTGATTAT CGAGGCAATT
GCAGAGCGCC TAGATTGGAA GCACGCTCTT TATGAAAAAG TCGCCCCTCA TATTCCAGCG
CATGTTCTCT TTGCCACAAA TACTTCAGGC CTTCCTATTG GTGAGCTTGC CAAAGGCTTC
TCAGGAGATT TAAAGAAACG CTTTTGTGGA GTGCACTTCT TTAATCCGCC ACGATATATG
CACTTGCTTG AGCTCATTCC GGCTGCTGAC ACAGATCCTG CGGTTTTAGA TGCTCTAGAA
ACGTTCGTGA CCTCTACCAT GGGCAAAGGG GTCGTGCGAG CAAAAGATAC GCCGAACTTT
ATTGGCAATC GAGTTGGGGG GTTTTCAATC TTGGCAGTAT TTGCCGAGGC GCAAAAGTTT
GGCCTTGGCT TTGATGAGGT GGATGCCATT ACCGGTAGTA AATTAGGCCG CGCTAAATCA
GCCACCTTTA GAACCAGTGA CGTCGTTGGC TTAGACACAA TGGCTCACGT CATAAAGACG
ATGGAGAATT CATTACAAGC CGATCCATTT TCTGCGCTAT TCAAAACACC CGATGTTGTC
ACTCAACTTA TTGCAAAGGG CGCTCTAGGA CAAAAAACAA AAGCAGGCTT TTATCGCAAA
GATGACAAGA ATGTTCTCGT GCTTGACGCC ACTTCAGGAG AATACAAACC CTCTACCGCG
ACAATCAACC CACTAGTTGA ACGTATTCTA AAAAAACCGA TTGCTGAGCG TCTTGAGTTG
CTAAGGGAGG CTGATGAACC GCAAGCGCAA TTCTTGTGGG CTATCTATCG CGATATCTTT
CATTACTGCG CCATTCATTT AGGAGATATT GCGCAATCAG CACGAGAAAT TGATTTTGCT
ATGCGTTGGG GATATGGCTG GGACAAAGGT CCATTTGAAG ATTGGCAAGC TGCTGGCGTT
ACGCAAATAG CAAACTGGAT CAAAGAAGAT ATTGATGCCG GCAAGACATT AAGCAAAGAA
GCTTTGCCAA AATGGCTGTT TAGTGGGCCA GTTGCCGATA AGCAAGCCTT CCATACGCCT
GAGGGCTCAT GGTCAGCCTC TGAAAATAAA TATGTACCCC GCTCTGACTT GCCGGTATAT
CAAAAGCAAG TATTTAGAGC GCCGTTATTA GGCGATGGAT CACCTGACCC TAAAACAGCA
GGGACTACTA TTTATGAAAA CCCAGATCTT CGCGCCTGGG TAAATGAAGC ATACCCTGAT
GTGTTGATTG CTTCATTTAG ATCCAAGATG AATACCATTA GCCCAGATGT ATTGAATGGC
ATACAAAAAT CGATTGAAAT CGCAGAGGCC AATTATGAAG GTCTTGTTAT CTGGCAACCA
AGCTCTCTAA AGCTTGGCAC CCCTGGCGGC CCCTTCTCTG CTGGCGCTAA CTTAGAGGCG
GCATTGCCTA TGGTAATGAA AGCTGGCCCA GCTGGTGTTG AGCCCTTTGT AAAGCTGTTC
CAAGACACTA TGATGCGCGT GAAGTATTCG CAGGTTCCTG TAATCTGCGC CGTATCTGGC
ATCGCACTTG GTGGTGGCTG TGAACTTGTC ATGCAATCAG CTCGCAGAGT TGCGGCAATT
GAAAGCCATA TCGGCCTAGT TGAAGTGGGT GTTGGACTAT TGCCTGCTGG TGGTGGATTA
AAAGAAGCGG CTATTCGTAC AGCCCAAGGG GTAGCCCTTG CTGGCAATAC CAACTACCTA
GACTTTACAA AAGCCTCTTT TGAAAATGCT GCGATGGCCA AAGTTTCTTC ATCTGCTCAA
GATGCAATGA AGATGGCTTA TCTGCAAAAA GGCGACATCA TTGTCCCCAA CGTCTATGAA
CTACTATCAC TTGCCCAAAA TCAAGTCAAA GCGATGCGCT ATGCAGGTTA TAGACCGCCC
ATTCCGTCAC TTATTCCAGT TGGCGGTCGA TCAGTAACCT CTACAGTCAT GGGTCAACTG
GTCAATATGC GTGATGGCGA CTTTATTTCT GAGCATGATG CCTTTATTGC CAAGAAGATT
ATTGACATCG TTACTGGTGG TGACGTCGAT GCTGGCACCT TAGTTACCGA GGAATGGCTA
CTCAAACTCG AGCGCCAAGC CTTTGTTGAG CTCATTGGCC ACCCCAAAAC TATGGAACGC
ATTATGGGCA TTCTCCAAAA CGGCAAGCCC GTTCGCAATT AA
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| Protein sequence | MSENKIIKKV AILGAGVMGA QIAAQCINVG LPVVLFDLPG KSDDGKPVHK NAIAIKAIEN
LKKLKPAPLG LASEANLIQA ANYEDDLGML TECDLIIEAI AERLDWKHAL YEKVAPHIPA
HVLFATNTSG LPIGELAKGF SGDLKKRFCG VHFFNPPRYM HLLELIPAAD TDPAVLDALE
TFVTSTMGKG VVRAKDTPNF IGNRVGGFSI LAVFAEAQKF GLGFDEVDAI TGSKLGRAKS
ATFRTSDVVG LDTMAHVIKT MENSLQADPF SALFKTPDVV TQLIAKGALG QKTKAGFYRK
DDKNVLVLDA TSGEYKPSTA TINPLVERIL KKPIAERLEL LREADEPQAQ FLWAIYRDIF
HYCAIHLGDI AQSAREIDFA MRWGYGWDKG PFEDWQAAGV TQIANWIKED IDAGKTLSKE
ALPKWLFSGP VADKQAFHTP EGSWSASENK YVPRSDLPVY QKQVFRAPLL GDGSPDPKTA
GTTIYENPDL RAWVNEAYPD VLIASFRSKM NTISPDVLNG IQKSIEIAEA NYEGLVIWQP
SSLKLGTPGG PFSAGANLEA ALPMVMKAGP AGVEPFVKLF QDTMMRVKYS QVPVICAVSG
IALGGGCELV MQSARRVAAI ESHIGLVEVG VGLLPAGGGL KEAAIRTAQG VALAGNTNYL
DFTKASFENA AMAKVSSSAQ DAMKMAYLQK GDIIVPNVYE LLSLAQNQVK AMRYAGYRPP
IPSLIPVGGR SVTSTVMGQL VNMRDGDFIS EHDAFIAKKI IDIVTGGDVD AGTLVTEEWL
LKLERQAFVE LIGHPKTMER IMGILQNGKP VRN
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