| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnec_0952 |
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| Symbol | |
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| ID | 6183914 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polynucleobacter necessarius subsp. necessarius STIR1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010531 |
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| Strand | + |
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| Start bp | 827469 |
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| End bp | 828776 |
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| Gene Length | 1308 bp |
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| Protein Length | 435 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 641671577 |
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| Product | peptidase U32 |
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| Protein accession | YP_001797757 |
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| Protein GI | 171463644 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0826] Collagenase and related proteases |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 77 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACTAAGA TTCCAGAACT TCTCGCCCCC GCTGGCAGCC TCAATATGCT GCAAACCGCA
TTTGATTTTG GTGCTGATGC TATCTATGCA GGCCAACCTC GATATTCACT TCGAGTTCGT
AATAACGACT TTGGCAAGAT TGAAGTTCTG AAACAAGGTA TTGATACCGC CCATGAAATG
GGTAAAAAGT TTTACTTAGT CTCCAATTTA TTGCCGCATG GCGGCAAAAT CCGGACCTAC
ATTAAGGATA TGGATCCGGT AATTGCATTA AAGCCCGATG CTTTGATCAT GTCAGATCCC
GGATTAATCA TGATGGCGCG TGAAGCATGG CCTGATATGC CAATTCATTT ATCTGTACAA
GCAAATACTG TCAATGGTGC CTCTGCAAAG TTCTGGCGCT CGGTTGGCAT CAGCCGTGTT
ATTTTGTCGC GCGAACTCTC CTTTAATGAA ATTGAAGAGG TGCGTCAAGA TTGCCCTGAA
ATGGAACTTG AGGTTTTTGT TCATGGCGCA TTATGTATCG CCTATTCAGG ACGATGCTTA
CTATCAGGCT ATATGTCTCA CCGTGATTCC AATCAAGGCG CCTGTACCAA TGCATGTCGA
TGGGATTACA AAGTTAAGGC TGGGCAGCAA AATGGTAGCG GCGATGTGGT TCTTCTTCAA
GAGGCGCGTC GCCCCGATGA TTTGATGCCA ATGGAAGAAG ATGAGCATGG CACCTACATC
ATGAACTCCA AAGATTTGCG CGCCATTGAA CATATAGAGC GCCTGACCAA GATGGGTGTT
GACTCATTTA AAATCGAAGG TCGCACTAAG TCACCCTACT ACGTTTCACG TACTGTTCAA
GCTTATAGAG CGGCGATTAA TGATGCCGTC GCCGGTAGAC CATTCAATAC TACTTTGCTA
GGCAATCTAG AGGGCCTAGC AAACCGCGGC TATACCGATG GCTTTTATGA ACGTCACCAC
GATAAAGAAT ATCAGTTGTA TATGCGCGGC CACTCCTTAT CCGGTCGCAG CTTATATGTT
GGCGAGACTC TCGACATTGA TTTAGTTAAC GGCCGCGTTA AGGTGGATGT CAAGAATCGC
TTCTCTGTTG GCGACAAAAT TGAAATAGTT GAACCAAGCG GAAATACCGA TGTTGTTTTG
ACTGAAATGT GGAATATGAA TGGCGAGTCA ATTGATGTTG CGCCAGGTTC AGGTCACTTT
GTATGGCTTA AAATCTCGAT GACAAGTAAG CATGCGTTTA TTGCTCGCTA TACACAAGAG
CCTGCGCCTG CAGAAGTTGC AGTGTCTTGC GCGACCTGCG GCGAATAA
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| Protein sequence | MTKIPELLAP AGSLNMLQTA FDFGADAIYA GQPRYSLRVR NNDFGKIEVL KQGIDTAHEM
GKKFYLVSNL LPHGGKIRTY IKDMDPVIAL KPDALIMSDP GLIMMAREAW PDMPIHLSVQ
ANTVNGASAK FWRSVGISRV ILSRELSFNE IEEVRQDCPE MELEVFVHGA LCIAYSGRCL
LSGYMSHRDS NQGACTNACR WDYKVKAGQQ NGSGDVVLLQ EARRPDDLMP MEEDEHGTYI
MNSKDLRAIE HIERLTKMGV DSFKIEGRTK SPYYVSRTVQ AYRAAINDAV AGRPFNTTLL
GNLEGLANRG YTDGFYERHH DKEYQLYMRG HSLSGRSLYV GETLDIDLVN GRVKVDVKNR
FSVGDKIEIV EPSGNTDVVL TEMWNMNGES IDVAPGSGHF VWLKISMTSK HAFIARYTQE
PAPAEVAVSC ATCGE
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