| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnec_0915 |
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| Symbol | rimO |
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| ID | 6184251 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polynucleobacter necessarius subsp. necessarius STIR1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010531 |
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| Strand | - |
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| Start bp | 791842 |
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| End bp | 793200 |
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| Gene Length | 1359 bp |
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| Protein Length | 452 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 641671545 |
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| Product | ribosomal protein S12 methylthiotransferase |
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| Protein accession | YP_001797727 |
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| Protein GI | 171463614 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0621] 2-methylthioadenine synthetase |
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| TIGRFAM ID | [TIGR00089] RNA modification enzyme, MiaB family
[TIGR01125] MiaB-like tRNA modifying enzyme YliG, TIGR01125 |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 0.642339 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 80 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | GTGGCCGGAA AGATTGGATT TGTATCCTTA GGGTGTCCTA AGGCACTTGT GGATTCTGAG
CTCATCCTCA CACAGCTGAG TGCTGAGGGA TATAAGACTG CTAAAGACTA TTCTGGAGCC
GATCTAGTTG TTGTTAATAC TTGCGGCTTC ATTGATTCCG CGGTTGAAGA AAGTCTCTCA
GCTATTGGCG AAGCATTAGC AGAGAATGGT AAAGTAATTG TTACTGGCTG CCTTGGCGCA
AGAAAGAATG CTGATGGATC CGATCTGATT CATAGCATTC ACCCTAAAGT GCTTGCTGTT
ACGGGGCCCC ATGCTACCGA TGAAGTGATG CAGGTAATTC ATTTGCATTT ACCTAAGCCG
CACGATCTAT ATACAGATTT AGTCCCGTCA GCTAGAGTAA GGCTAACTCC AAAACATTAC
GCCTACCTCA AAATTAGCGA AGGCTGTAAC CATCGTTGTA CTTTTTGCAT CATTCCAAAC
TTGCGTGGTG ATTTAGTTTC CCGTCCAATT GGTGATGTTT TATTAGAAGT AAAGCGTTTA
TTTGAGTCAG GCGTTAAAGA GCTATTGGTT GTCTCTCAAG ACACTAGTGC CTATGGTGTA
GACATTCAAT ATCGAACCGG ATTTTGGGAT GGTAAGCCAG TCAAGACCAA AATGTTTGAT
TTGGTTAACA CCTTAAATCA AATTGCACGC GAACATCAAG CATGGGTACG CTTGCATTAT
GTCTATCCTT ATCCGCACGT GGATGATATC TTGCCATTAA TGGCTGAGTT TGCAGAGCAC
GGTTATGGTG TTTTGCCATA TCTCGATATT CCTTTGCAGC ATGCTCACCC CGATGTACTT
AAGAAGATGA AGCGTCCTGC TAGTGGGGAA AAGAATTTAG AACGAATCTT GGCCTGGCGT
GAAGCCTGTC CAGACTTAGT GATACGTAGC ACCTTCATCG CTGGGTTTCC TGGGGAAACT
GAAGGGGAGT TTGAGTATTT GCTTAATTTC TTGGATGAGG CCCAAATTGA TAGGGCGGGG
TGTTTCGCCT ATTCACCTGT TGATGGTGCC ACCGCTAATG AATTGGCAAA CCCTGTTCCG
GATCAAATTC GGGAAGATCG TCGGGCACGT CTTATGGCTA AGGCTGAAGA AATTTCCGTT
GGGCGACTTG CTAAAAAAAT AGGCAAACGC CTCCAAGTTA TCATTGATCG AGTCGATGAT
CATGGTGGAA TAGGTAGAAC CATTGGGGAT GCCCCCGAAA TAGATGGTCT GGTGAGGGTT
TTGCCAGCAA ACAAGCCTTC CAAACGCTAT CGCGCAGGTG AAATTATCCG AGTTACTGTG
ATTAGCTCCC AAGGGCATGA CCTAATAGCC GAAACTTGA
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| Protein sequence | MAGKIGFVSL GCPKALVDSE LILTQLSAEG YKTAKDYSGA DLVVVNTCGF IDSAVEESLS
AIGEALAENG KVIVTGCLGA RKNADGSDLI HSIHPKVLAV TGPHATDEVM QVIHLHLPKP
HDLYTDLVPS ARVRLTPKHY AYLKISEGCN HRCTFCIIPN LRGDLVSRPI GDVLLEVKRL
FESGVKELLV VSQDTSAYGV DIQYRTGFWD GKPVKTKMFD LVNTLNQIAR EHQAWVRLHY
VYPYPHVDDI LPLMAEFAEH GYGVLPYLDI PLQHAHPDVL KKMKRPASGE KNLERILAWR
EACPDLVIRS TFIAGFPGET EGEFEYLLNF LDEAQIDRAG CFAYSPVDGA TANELANPVP
DQIREDRRAR LMAKAEEISV GRLAKKIGKR LQVIIDRVDD HGGIGRTIGD APEIDGLVRV
LPANKPSKRY RAGEIIRVTV ISSQGHDLIA ET
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