| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnec_0914 |
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| Symbol | |
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| ID | 6184320 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polynucleobacter necessarius subsp. necessarius STIR1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010531 |
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| Strand | - |
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| Start bp | 790577 |
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| End bp | 791761 |
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| Gene Length | 1185 bp |
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| Protein Length | 394 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 641671544 |
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| Product | beta-ketothiolase |
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| Protein accession | YP_001797726 |
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| Protein GI | 171463613 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG0183] Acetyl-CoA acetyltransferase |
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| TIGRFAM ID | [TIGR01930] acetyl-CoA acetyltransferases |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 0.579266 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 81 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTCGTG ATGTCGTTGT CTTAAGCGCA GTTCGTTCCG CAATTGGTGC CTTTAACGGT
TCGCTCAGCA GCTTTGAGCC GTCTGAGCTT GGCGGCATCG TAATGAAAGA AGCGGTAGCA
CGCTCCGGTG TGGATCCAGC ATTAATTAAT TACATTACTG TTGGTAACAC TATTCCTACA
GATAGTCGCT ACGCTTATGT TGCACGTGTT GCTTCAGTTC AAGCAGGCCT TCCAATGGAA
TCCGTTGCGA TGGCATTAAA TCGTTTGTGC AGCTCTGGTT TGCAAGCCAT CGTCACTACT
GCTCAGCAAA TTATGTTGGG TGACTGTGAT TACGGTATTG GTGGTGGCGT TGAGGTAATG
TCACGCGGTA TGTATGGTTC ACCAGCAATG CGCAGCGGTG CGCGTATGGG TGATACTAAG
ATGCTTGACT TGATGGTTTC TGTATTAACA GACCCGTTCG GCGTTGGTCA TATGGGCGTT
ACAGCAGAAA ACCTTGTTGA AAAATGGAAG CTTACTCGTG AAGAGCAGGA TGCTTTCGCC
GTTGAATCAC ATCGCCGTGC AGCACATGCA ATTAAAGAAG GTCGTTTCAA ATCTCAGATC
GTCCCTATCA CTATTAAGAC TCGTAAGGGC GAAGTAGTGT TTGATACTGA TGATCATTGC
AAGCCAGATA CAACAATGGA AACATTGGCA AAGATGAAGG CAGTGTTTAA GAAAGAAGGC
GGCTCAGTTA CTGCAGGTAA CGCTTCAGGT ATCAATGATG GCGCTGCATT CTTTGTCTTG
GCTGATGCTG AAACAGCCAA AAAAGCTGGT CATAAACCGA TCGCCCGTTT AGTTTCTTAT
GCGGTTGCTG GCGTGCCAAA TCACATCATG GGTGAAGGTC CAATTCCTGC AACAAAATTG
GCGCTTGAGC GCGCTGGCCT TAAATTAGAT CAAATTGATG TGATTGAGTC TAACGAAGCG
TTTGCTGCAC AAGCATTAGC CGTTACTAAA GGCTTGGGCT TGGATCCAGC CAAGACTAAC
GTCAATGGAG GCGCTATCGC TTTAGGCCAT CCGATTGGTT GCTCTGGTGC CGCAATTGCT
ACAAAAGCAA TTCATGAGCT ACACCGCGTT CAAGGTAAAT ACGCTTTGGT AACAATGTGT
ATTGGCGGTG GTCAAGGTAT TGCAACTATT TTTGAGCGTC TCTAA
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| Protein sequence | MSRDVVVLSA VRSAIGAFNG SLSSFEPSEL GGIVMKEAVA RSGVDPALIN YITVGNTIPT
DSRYAYVARV ASVQAGLPME SVAMALNRLC SSGLQAIVTT AQQIMLGDCD YGIGGGVEVM
SRGMYGSPAM RSGARMGDTK MLDLMVSVLT DPFGVGHMGV TAENLVEKWK LTREEQDAFA
VESHRRAAHA IKEGRFKSQI VPITIKTRKG EVVFDTDDHC KPDTTMETLA KMKAVFKKEG
GSVTAGNASG INDGAAFFVL ADAETAKKAG HKPIARLVSY AVAGVPNHIM GEGPIPATKL
ALERAGLKLD QIDVIESNEA FAAQALAVTK GLGLDPAKTN VNGGAIALGH PIGCSGAAIA
TKAIHELHRV QGKYALVTMC IGGGQGIATI FERL
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