Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pnec_0890 |
Symbol | |
ID | 6183048 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polynucleobacter necessarius subsp. necessarius STIR1 |
Kingdom | Bacteria |
Replicon accession | NC_010531 |
Strand | - |
Start bp | 759333 |
End bp | 759854 |
Gene Length | 522 bp |
Protein Length | 173 aa |
Translation table | 11 |
GC content | 41% |
IMG OID | 641671516 |
Product | protein of unknown function UPF0227 |
Protein accession | YP_001797703 |
Protein GI | 171463590 |
COG category | [R] General function prediction only |
COG ID | [COG3150] Predicted esterase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 0.119021 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 73 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACGGGTG ATACAGTGAT AGCCATGTCT ACTATTGAGA ATCCTATTCA GTGGTACTGC CCACAACTTT TAGCATCACC TAAAGTTAGT ATGAGTATGG TCGAAAAACA TATTAATGAA TCAAAACATG ATCACTTAGC AGTGATTGGA TCTTCTTTGG GTGGTTACTA TGCAAATTAC CTCGCCGAAA AATATGGATG CAAAGCTGTT GTACTAAATC CTGCTGTAAG AGCCCCAAAG GAATTAGAGT CGCAGGTGGG AATGCTTACC TCCTACGATA CTAATGAACC TTATGACTTT CGCCCAGAGT ACATTGATGA GTTAAAAGCT TTGCAAGTTC AGGCTGTCAG CAATCCATCT CGATATTTCT TAATAGCAGC AAAAGGCGAT GAGCTCCTAG ATTGGCGCGA AATGGTTGAG TTTTATGAAG GCGCTCAACA GTTAGTGTTA GAGGGAAGTG ATCACGGTAT TGCTGATTAC TCGGCTTATT TGCCTAAGGT TTTGGAGTTC ATCACTCAAT AG
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Protein sequence | MTGDTVIAMS TIENPIQWYC PQLLASPKVS MSMVEKHINE SKHDHLAVIG SSLGGYYANY LAEKYGCKAV VLNPAVRAPK ELESQVGMLT SYDTNEPYDF RPEYIDELKA LQVQAVSNPS RYFLIAAKGD ELLDWREMVE FYEGAQQLVL EGSDHGIADY SAYLPKVLEF ITQ
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