Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pnec_0885 |
Symbol | |
ID | 6184500 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polynucleobacter necessarius subsp. necessarius STIR1 |
Kingdom | Bacteria |
Replicon accession | NC_010531 |
Strand | + |
Start bp | 757137 |
End bp | 757928 |
Gene Length | 792 bp |
Protein Length | 263 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 641671511 |
Product | hydrolase, TatD family |
Protein accession | YP_001797698 |
Protein GI | 171463585 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0084] Mg-dependent DNase |
TIGRFAM ID | [TIGR00010] hydrolase, TatD family |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 0.46453 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 74 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTTCATAG ACTCCCATTG CCATCTGGAT TTCCCGGAAT TCCAGTCTCG ATTACCAGAA GTGCTTGCAA ATATGCAGGC AGCCAAAGTC AGTCATGCAT TGTGTGTTTC GGTTGATTTG CCGGACTTTC CAAATGTATT GAAATTGGCA AAAGACCACC CCAATTTATA TGCCTCTGTG GGCGTGCATC CTGATTATGA AGATACCCCC GAACCAAGCT TAGAATTCTT AGTTAGCACC GCTATAGCGA ATTCCAAAAT TGTAGCTATC GGTGAAACAG GGCTCGACTA CTATCGCATG GGTGATCGCA GCTATGAATC CATGGAATGG CAACGTGATC GCTTTAGAAC GCACATAAGA GCGTCCATAG CATCTCAAAA GCCCCTCATT ATTCATACAC GCTCAGCATC TGAAGACACC ATCAAAATCC TTAAAGAGGA GGGTGCTCAG AAAATCGGCG GGGTAATGCA CTGCTTTACA GAATCATACG AAGTGGCCAA GGATGCCATG GATATGGGTT TTTATATCTC CTTTTCAGGG ATTGTGACCT TTAAAAGTGC CAAGGATTTA CAAGAAACAT GCAAACGGGT GCCGCTAAAC AGAATGTTAA TAGAAACGGA CTCACCTTAT TTGGCGCCAA TTCCGTATCG TGGCAAAACA AATGAGCCAG CCTGGGTGTC AAAAGTAGGT GAATTTATCG CTGATCTGAA GGGCGTCTCT GTGGAAGAAT TGGCCAACCA CACATCAGAT AATTTTTATC AATGTTTTCA ATTAAATAGA CAATCATTAT GA
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Protein sequence | MFIDSHCHLD FPEFQSRLPE VLANMQAAKV SHALCVSVDL PDFPNVLKLA KDHPNLYASV GVHPDYEDTP EPSLEFLVST AIANSKIVAI GETGLDYYRM GDRSYESMEW QRDRFRTHIR ASIASQKPLI IHTRSASEDT IKILKEEGAQ KIGGVMHCFT ESYEVAKDAM DMGFYISFSG IVTFKSAKDL QETCKRVPLN RMLIETDSPY LAPIPYRGKT NEPAWVSKVG EFIADLKGVS VEELANHTSD NFYQCFQLNR QSL
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