| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnec_0854 |
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| Symbol | |
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| ID | 6183053 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polynucleobacter necessarius subsp. necessarius STIR1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010531 |
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| Strand | + |
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| Start bp | 735103 |
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| End bp | 736968 |
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| Gene Length | 1866 bp |
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| Protein Length | 621 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 641671481 |
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| Product | ATP-dependent metalloprotease FtsH |
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| Protein accession | YP_001797670 |
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| Protein GI | 171463557 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0465] ATP-dependent Zn proteases |
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| TIGRFAM ID | [TIGR01241] ATP-dependent metalloprotease FtsH |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 0.946153 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 62 |
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| Fosmid unclonability p-value | 0.500418 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTCCAAA AAATCGGTGT GTGGCTCATT GTGGGCTTGG TGCTTTTTAC TGTTTTTAAA
CAGTTTGATA AGCCCAAGGA CCAGAATCAA GTCACGTATT CCCAATTCAT GGATGACGCT
AAAGCAGGAA AAATAAAGCG CGTAGATGTG CAAGGTCGCA CATTGCAGGT CACACCTGCT
GATGGTAATA AATATTCCAT CATCTCTCCA GGTGATATTT GGATGGTTGG TGATTTAATG
AAGTATGGCG TTCAAGTTAC AGGCAAAGCA GAGGATGAGC CAAATATGCT GGTATCTGCT
TTATATTACC TTGGACCAAC ACTATTGATT ATTGGTTTTT GGTTTTTCAT GATGCGACAA
ATGCAAGGCG GCGGCAAAGG CGGCGCATTC TCCTTTGGTA AATCTAAAGC GCGCTTGATC
GATGAAAACA GCAATACCGT TACTTTTGCA GATGTAGCTG GGTGTGATGA AGCAAAAGAA
GAAGTATTTG AGCTGGTGGA CTTCTTAAAA GATCCACAAA AGTTCCAAAA ACTGGGTGGT
CGTATTCCTC ATGGTGTACT GCTTGTTGGT CCTCCGGGTA CCGGTAAAAC CCTTTTGGCA
CGTGCCATTG CGGGTGAAGC CAAAGTTCCG TTCTTCTCCA TCTCAGGATC TGATTTTGTA
GAGATGTTTG TTGGTGTCGG TGCCTCTCGC GTTCGTGATA TGTTTGAAAA CGCCAAGAAA
AATTCTCCTT GCATCATCTT TATTGATGAA ATTGATGCTG TTGGTCGTCA TCGCGGTGCT
GGTATGGGTG GAGGTAATGA TGAGCGAGAA CAAACTTTAA ACCAAATGCT TGTTGAGATG
GATGGTTTTG AGAGTAATAG TGGTGTCATC GTCGTTGCCG CTACCAATCG TTCTGATGTA
TTAGATAAGG CATTATTGCG TCCGGGTCGT TTTGACCGTC AAGTGCATGT TGGTTTGCCA
GATATTCGCG GTCGCGAACA GATCCTGCAA GTGCACATGC GTAAAGTGCC TATTGACCCA
GATGTAAATG CGGCCATATT GGCTCGTGGT ACCCCTGGTT TCTCTGGCGC TGATTTAGCG
AACTTGGTAA ACGAAGCTGC CTTGTTTGCT GCTCGTCGCA ACAAGCGTTC AGTTGATATG
AAAGACTTCG AAGACGCTAA AGACAAGATT TATATGGGTC CTGAGCGTAA GTCTGCTGTG
ATGCGTGAAG AAGAGCGCCG CAATACCGCC TATCACGAGT CTGGCCATGC TGTTGTGGCC
AAGGTATTGC CTAAGGCGGA TCCGGTTCAT AAGGTCACCA TCATGCCCCG TGGAATGGCA
TTGGGCGTAA CTTGGCAGCT GCCAGAGTTT GATCGAGTGA ATCTTTATAA AGATCGCATG
TTGGAAGAGT TGGCGATTCT ATTTGGTGGC CGTGCAGCAG AAGAGGTTTT CCTTCACTCC
ATGAGTACTG GCGCATCAAA TGACTTTGAG CGCGCTACTA AGATGGCTCG CGATATGGTT
ACTCGCTACG GCATGAGTGA TAGCTTGGGC ACGATGGTTT ATGTTGATAC CGAATCCGAG
AGCATTTTTG GCCGTAACAG TACTAAGACC GTTTCTGAGT TGACTCAGCA AAAAGTCGAT
GCAGAAATTC GCACCTTAAT TGATAGTCAA TATGCTTTAG CAAGATCTAT CTTGGAGAAA
AATCGAGATA AGGTTGAGGC GATGGTTGCA GCATTGTTGG AATGGGAAAC TATTGACGCT
GAGCAGATTA ATGACATCAT GGAAGGTCGT CCACCACGTG CACCTTTGCC ACCACCAGGA
ACCCAGTTTG GTAATTCTGC GGGCACTACT GGTCCTGCCG CTGGTAGCGC ACCCGCTACA
GCATAA
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| Protein sequence | MFQKIGVWLI VGLVLFTVFK QFDKPKDQNQ VTYSQFMDDA KAGKIKRVDV QGRTLQVTPA
DGNKYSIISP GDIWMVGDLM KYGVQVTGKA EDEPNMLVSA LYYLGPTLLI IGFWFFMMRQ
MQGGGKGGAF SFGKSKARLI DENSNTVTFA DVAGCDEAKE EVFELVDFLK DPQKFQKLGG
RIPHGVLLVG PPGTGKTLLA RAIAGEAKVP FFSISGSDFV EMFVGVGASR VRDMFENAKK
NSPCIIFIDE IDAVGRHRGA GMGGGNDERE QTLNQMLVEM DGFESNSGVI VVAATNRSDV
LDKALLRPGR FDRQVHVGLP DIRGREQILQ VHMRKVPIDP DVNAAILARG TPGFSGADLA
NLVNEAALFA ARRNKRSVDM KDFEDAKDKI YMGPERKSAV MREEERRNTA YHESGHAVVA
KVLPKADPVH KVTIMPRGMA LGVTWQLPEF DRVNLYKDRM LEELAILFGG RAAEEVFLHS
MSTGASNDFE RATKMARDMV TRYGMSDSLG TMVYVDTESE SIFGRNSTKT VSELTQQKVD
AEIRTLIDSQ YALARSILEK NRDKVEAMVA ALLEWETIDA EQINDIMEGR PPRAPLPPPG
TQFGNSAGTT GPAAGSAPAT A
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