| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnec_0849 |
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| Symbol | carB |
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| ID | 6183303 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polynucleobacter necessarius subsp. necessarius STIR1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010531 |
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| Strand | + |
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| Start bp | 729449 |
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| End bp | 732712 |
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| Gene Length | 3264 bp |
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| Protein Length | 1087 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 641671476 |
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| Product | carbamoyl phosphate synthase large subunit |
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| Protein accession | YP_001797665 |
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| Protein GI | 171463552 |
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| COG category | [E] Amino acid transport and metabolism
[F] Nucleotide transport and metabolism |
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| COG ID | [COG0458] Carbamoylphosphate synthase large subunit (split gene in MJ) |
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| TIGRFAM ID | [TIGR01369] carbamoyl-phosphate synthase, large subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 54 |
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| Fosmid unclonability p-value | 0.173852 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCTAAGC GTAGCGACAT TAAGAGCATT CTGATTATTG GTGCGGGTCC GATTGTAATT
GGTCAGGCTT GTGAGTTTGA TTACTCTGGC GCGCAAGCAT GTAAAGCACT GCGTGACGAA
GGTTACAAAG TTATTTTGGT TAACAGTAAT CCTGCAACCA TCATGACCGA TCCTGAAATG
GCTGATGTTA CTTACATTGA GCCAATTACC TGGGAAGTTG TAGAGCGCAT TATTGCTACA
GAAAAGCCTG ATGTTATTTT GCCAACGATG GGTGGCCAAA CAGCTTTGAA CTGCGCTTTG
GATTTGCATC GCCATGGTGT TTTGGAAAAG TACGGATGCA AATTAATTGG TGCATCACCA
GAAGCTATTG ATAAAGCAGA AGACCGTCAG AAGTTTAAAG AGGCCATGAC TAAGATTGGT
CTGGGTTCGG CTAAGTCAGG TATCGCGCAC TCGATGGATG AAGCGCATGA AGTGCAGCAA
CGTATTCAGC ATGAGACTGG TAGCTCTGGC TTCCCAGTGG TTATCCGACC ATCATTCACC
ATGGGTGGAT CAGGCGGCGG TATTGCTTAT AACCGCGAGG AATTCGAAGA GATTTGCAAA
CGTGGTCTCG ATTTATCTCC AACTCGCGAG CTCTTGATTG AAGAATCTCT CTTGGGTTGG
AAAGAGTTTG AGATGGAAGT GGTGCGCGAT CGCAATGATA ATTGCATCAT TGTCTGCTCG
ATTGAAAACT TAGACCCAAT GGGGGTTCAT ACCGGCGACT CAATTACCGT TGCGCCAGCG
CAAACATTGA CTGATAAAGA GTATCAAATC ATGCGTAATG CATCGATTGC AGTCTTGCGA
GAAATTTGCG TGGATACTGG CGGGTCTAAC GTTCAGTTCT CAATTAATCC AGTTGATGGT
CGCATGATCG TCATCGAAAT GAATCCACGG GTATCCCGTT CATCTGCCCT AGCTTCAAAG
GCAACAGGAT TCCCAATCGC AAAGATTGCT GCTAAATTAG CTGTGGGCTT TACCCTGGAT
GAACTCAAGA ACGACATTAC TGGTGGCGCA ACACCAGCTT CTTTTGAGCC TTCAATTGAT
TACGTAGTGA CCAAAATTCC ACGCTTTGCA TTTGAGAAGT TCCCACACGC AGATTCACGC
CTAACTACCC AGATGAAATC TGTTGGTGAA GTCATGGCTA TTGGTCGAAC TTTCCAAGAG
TCTTTCCAAA AGGCGCTTCG TGGATTAGAG GTTGGGGTTG ATGGTCTCGA TGAGGTGTCT
GCTGATCTCG ACGACATCAT CAATGAAATT AATGAACCTG GCCCAGATCG CATCTGGTAC
TTGGCTGATG CATTCCGTAT GGGCATGGGG CTTGATGAGA TATATGCTGA AACTAAAGTT
GATCCTTGGT TCTTGGAGCA AATTGAAGAG CTCATCACGA TTGAGTCAGA GCTTAAGCAG
CGTAAGATTG ATAGCTTAAC TGCGCCAGAG TTACGATTTG TAAAGCAAAA AGGTTTTTCT
GATCGTCGAT TGGCAAAGTT GCTTGGTATT GATGCTGCCT CTGTTCGAGC TGCACGTCAC
CGTTTAAAAG TAGTTCCAGT CTATAAGCGG GTTGATACCT GTGCTGCTGA GTTCTCAACT
AATACGGCGT ATTTGTATTC CACATATGAA GCAGAGCATG GCGAGTGTGA ATCTCAGCCG
ACCAGCAAAG ATAAGATTAT GGTATTGGGT GGCGGCCCCA ATAGAATTGG TCAGGGCATT
GAGTTTGACT ACTGCTGTGT GCATGCAGCT TTAGCAATGC GTGAAGACGG CTATGAAACC
ATCATGGTTA ACTGCAATCC AGAAACTGTT TCTACCGACT ATGATACGTC CGATCGTCTC
TATTTTGAGC CATTAACACT AGAAGACGTT TTAGAAATTG TTGCTAAAGA AAAGCCTAAA
GGGGTCATCG TTCAGTATGG CGGTCAAACA CCTTTGAAAT TGGCTTTAGA TCTCGAACAC
AATGGTGTTC CGATTATCGG CACACCACCG GACATGATTG ATGCAGCTGA GGATCGCGAG
CGCTTCCAAA AACTACTAAA AGATCTTGGC TTGCGTCAAC CTCCTAATCG TACAGCGCGT
ACAGAAGAAG AGGCTCTTAA GCTTGCCGAA GAAATTGGCT ACCCATTAGT TGTGCGCCCC
TCCTATGTGT TGGGTGGTCG CGCGATGGAA ATCGTTCATG ATGGACGTGA CCTTGAGCGC
TATATGCGTG AGGCCGTGAA AGTCTCACAT GACTCCCCAG TTTTGCTTGA TCGCTTCTTG
AATGATGCAA TTGAGTGTGA TGTTGACTGT ATCAGTGATG GCGAAAAAGT CTTCATTGGT
GGAGTTATGG AGCACATTGA GCAAGCCGGC GTTCACTCTG GTGACTCGGC CTGTTCATTG
CCACCTTATT CGCTTTCTGA TGCAACTGTA GAGGAAATCA AACGTCTAAC TGCTGCGATG
GCTAAAGGCT TAAATGTCGT CGGCCTGATG AATGTTCAGT TTGCGATTCA GAACGTAGAT
GGGAAAGATA TTATCTATGT TCTTGAAGTG AATCCACGCG CCTCAAGAAC CGTACCATTT
GTATCTAAAG CAACTGGTTT GCAGCTGGCT AAGATTGCTG CTCGTTGCAT GGTCGGTCAG
ACCCTAGCGC AGCAAGGCAT TACAGCTGAA GTCAAGCCGC CATACTTCTC TGTCAAGGAA
GCAGTTTTCC CATTCAATAA GTTCCCCGGG ATTGATCCTA TCCTTGGACC AGAAATGCGC
TCTACCGGCG AAGTCATGGG CGTTGGGAAA ACCTTTGGTG AAGCATTGTT TAAATCTCAA
TTGGGCGCGG GGATTAAGCT TCCTAAGAGC GGTACAGTGC TTCTAACCGT AAAAGATAGC
GATAAATCTA AGGCGATTGA AGTGGTTAAG TTATTGCATC AACTGGGTTT TCCTATGGTT
GCTACCAAAG GTACCGCTGC TGCAATTGAG GCGGCAGGTT TACCGGTTCG TGTGGTGAAT
AAGGTCAAAG ATGGGCGTCC TCACATTGTT GATTTCATCA AGAATGGGGA AATTTCACTG
GTATTTACGA CCGTTGATGA AACACGCACT GCTATTGCCG ACTCAAGATC GATCCGTACT
AGTGCTCAGG CTAATGGCGT AACTTATTAC ACAACCATTA GCGCGGCTCG TGCAGTGATG
GATGGTTTGT TGGCATCTCA AAATGGCAAG CTAGAGTCCC TTGAGGTCTA TTCATTACAA
AACTTACATC GGGCACTTAT TTAA
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| Protein sequence | MPKRSDIKSI LIIGAGPIVI GQACEFDYSG AQACKALRDE GYKVILVNSN PATIMTDPEM
ADVTYIEPIT WEVVERIIAT EKPDVILPTM GGQTALNCAL DLHRHGVLEK YGCKLIGASP
EAIDKAEDRQ KFKEAMTKIG LGSAKSGIAH SMDEAHEVQQ RIQHETGSSG FPVVIRPSFT
MGGSGGGIAY NREEFEEICK RGLDLSPTRE LLIEESLLGW KEFEMEVVRD RNDNCIIVCS
IENLDPMGVH TGDSITVAPA QTLTDKEYQI MRNASIAVLR EICVDTGGSN VQFSINPVDG
RMIVIEMNPR VSRSSALASK ATGFPIAKIA AKLAVGFTLD ELKNDITGGA TPASFEPSID
YVVTKIPRFA FEKFPHADSR LTTQMKSVGE VMAIGRTFQE SFQKALRGLE VGVDGLDEVS
ADLDDIINEI NEPGPDRIWY LADAFRMGMG LDEIYAETKV DPWFLEQIEE LITIESELKQ
RKIDSLTAPE LRFVKQKGFS DRRLAKLLGI DAASVRAARH RLKVVPVYKR VDTCAAEFST
NTAYLYSTYE AEHGECESQP TSKDKIMVLG GGPNRIGQGI EFDYCCVHAA LAMREDGYET
IMVNCNPETV STDYDTSDRL YFEPLTLEDV LEIVAKEKPK GVIVQYGGQT PLKLALDLEH
NGVPIIGTPP DMIDAAEDRE RFQKLLKDLG LRQPPNRTAR TEEEALKLAE EIGYPLVVRP
SYVLGGRAME IVHDGRDLER YMREAVKVSH DSPVLLDRFL NDAIECDVDC ISDGEKVFIG
GVMEHIEQAG VHSGDSACSL PPYSLSDATV EEIKRLTAAM AKGLNVVGLM NVQFAIQNVD
GKDIIYVLEV NPRASRTVPF VSKATGLQLA KIAARCMVGQ TLAQQGITAE VKPPYFSVKE
AVFPFNKFPG IDPILGPEMR STGEVMGVGK TFGEALFKSQ LGAGIKLPKS GTVLLTVKDS
DKSKAIEVVK LLHQLGFPMV ATKGTAAAIE AAGLPVRVVN KVKDGRPHIV DFIKNGEISL
VFTTVDETRT AIADSRSIRT SAQANGVTYY TTISAARAVM DGLLASQNGK LESLEVYSLQ
NLHRALI
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