Gene Pnec_0842 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnec_0842 
Symbol 
ID6183637 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolynucleobacter necessarius subsp. necessarius STIR1 
KingdomBacteria 
Replicon accessionNC_010531 
Strand
Start bp724314 
End bp725132 
Gene Length819 bp 
Protein Length272 aa 
Translation table11 
GC content46% 
IMG OID641671471 
ProductMethyltransferase type 11 
Protein accessionYP_001797660 
Protein GI171463547 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG2226] Methylase involved in ubiquinone/menaquinone biosynthesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones68 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATACCAA CCCCACACAT CCCTACTCAG GTGCCCGCAC CCCCCTGGAG CTCTTGGGAG 
AAATGGCTGC AATCCCCTCC TGGGCGCTAT GTATTGAATT GGGAGCAACG CTGTTTTGAC
CAAATTGTTG CCGATGTCTT TGGGTTTCAT GCGGTCCAAA TTGGCCTACC CCAAATTAAT
ACTCTTTCCG AGAATCGGAT GCCTTTACAT GTTATTTTGG TGAACTCCAA CGATAGCAGG
ACTGAGGCTG GACGTTACAA CTGGCATTTA ATTGAGGCAA GCTCAACAGA ACTCCCTTTT
GCAAGTGAGA GCCTAGATTT AATTGTTCTC CCTCATGTTT TGGAATTTGC TGCCGACCCC
CATCAAATAC TGCGTGAAGT AGATCGAGTC CTGCGACCTG AGGGTAGATT GATTATTTCT
GGCTTTAATC CAACTAGCTT ATGGGGCGCA AAACAGTATC TCAGTAGGCT TGTGGGAAGC
CCCTATCTAC CAAGAGATGG GCAATTTATT AGTCTAATAC ACCTCAAAGA CTGGTTGGAG
CTCCTCAATT TCTCACTTGA TCGCGGACAT TTTGGTTGCT ACAAGTTCCC ACTTCAAGGC
GAGGCCGTTA TGAGAAAGAT GAATTTTCTA GAAAAAATGG GGAATCGCTG GTGGCCTATA
TTCGGGGCTG TTTTCTTGGT CTCTGCCATT AAGCGCCAGC AAGGTATTCG CCTTATAGGA
CCAGCGTCAC TGGTTCGCAT TCCAGCCATA AAACAACTTA ATCCAGCAAC TGAACGACGC
AATACCCAAA AATGCCTTAA AAACAGCAAT ACCAAGTAA
 
Protein sequence
MIPTPHIPTQ VPAPPWSSWE KWLQSPPGRY VLNWEQRCFD QIVADVFGFH AVQIGLPQIN 
TLSENRMPLH VILVNSNDSR TEAGRYNWHL IEASSTELPF ASESLDLIVL PHVLEFAADP
HQILREVDRV LRPEGRLIIS GFNPTSLWGA KQYLSRLVGS PYLPRDGQFI SLIHLKDWLE
LLNFSLDRGH FGCYKFPLQG EAVMRKMNFL EKMGNRWWPI FGAVFLVSAI KRQQGIRLIG
PASLVRIPAI KQLNPATERR NTQKCLKNSN TK