| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnec_0819 |
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| Symbol | tpiA |
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| ID | 6182879 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polynucleobacter necessarius subsp. necessarius STIR1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010531 |
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| Strand | + |
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| Start bp | 705191 |
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| End bp | 705949 |
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| Gene Length | 759 bp |
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| Protein Length | 252 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 641671447 |
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| Product | triosephosphate isomerase |
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| Protein accession | YP_001797637 |
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| Protein GI | 171463524 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0149] Triosephosphate isomerase |
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| TIGRFAM ID | [TIGR00419] triosephosphate isomerase |
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Plasmid Coverage information |
| Num covering plasmid clones | 36 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 78 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGACCAC TCATCGTAAT CGGCAACTGG AAAATGAACG GCAGTCTTGC AAATAATCAA
GACTGGGTTA AGACTGTTGC TCGCGGCATG GAGAGTGGTA TGCCATCTGG TCGTAAATAT
GCAGTTTGCC CTCCTTTTCC ATACTTGCAA CAATGTGCTG ACTTAATTAA AGGACATTCG
TTGGCGTTCT TAAGTTTGGG TGCTCAGGAT GCTTCGGCCT ATGGCTCTGG GGTCTACACC
GGAGAGGTGG CAGCAGCAAT GCTGAAGGAG TTTGGCTGCA CTTGCGTCAT CGTAGGCCAT
TCAGAGCGCC GTCAAATGCA TCAAGAAGTT GATGAGGTGA TTGCGTCTAA AGCGCTTCAA
GTTTTGGACA ATAGCATGAC ACCAGTAATT TGTGTTGGTG AAACGGCTGA TGAGAGGAAT
TCTGGTAGAG CCCAAGAGAT TGTTTGCTCT CAGGTTGCAA AGCAAGTAGG CGTTTTGCAG
GATCGTCTGG TTGACTGCCT AATTGCCTAT GAGCCTGTAT GGGCGATAGG CACCGGTAAA
GTGGCTAGCG CTCAAGTTGC ACAAGACATG CATCGCGCTA TTCGCTTGCA ATTGGCTGAA
TTTAATGAGG ACGTAGCGTC TCATGTAGGA ATTTTGTATG GCGGCAGTGT CAAACCTGAT
AATGCCGTTG AATTGTTTGC CATGCCTGAT ATTGATGGCG GATTGGTTGG GGGTGCTTCA
CTGAGTCCTC AAGACTTTCT AGCCATCTGC AAGGCATAG
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| Protein sequence | MRPLIVIGNW KMNGSLANNQ DWVKTVARGM ESGMPSGRKY AVCPPFPYLQ QCADLIKGHS
LAFLSLGAQD ASAYGSGVYT GEVAAAMLKE FGCTCVIVGH SERRQMHQEV DEVIASKALQ
VLDNSMTPVI CVGETADERN SGRAQEIVCS QVAKQVGVLQ DRLVDCLIAY EPVWAIGTGK
VASAQVAQDM HRAIRLQLAE FNEDVASHVG ILYGGSVKPD NAVELFAMPD IDGGLVGGAS
LSPQDFLAIC KA
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