Gene Pnec_0811 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnec_0811 
SymbolilvH 
ID6183931 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolynucleobacter necessarius subsp. necessarius STIR1 
KingdomBacteria 
Replicon accessionNC_010531 
Strand
Start bp696322 
End bp696813 
Gene Length492 bp 
Protein Length163 aa 
Translation table11 
GC content47% 
IMG OID641671440 
Productacetolactate synthase 3 regulatory subunit 
Protein accessionYP_001797630 
Protein GI171463517 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0440] Acetolactate synthase, small (regulatory) subunit 
TIGRFAM ID[TIGR00119] acetolactate synthase, small subunit 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones77 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCCATA TTATTTCTGT ACTCATTGAG AACGAGCCGG GCGCTTTGTC ACGAGTAGTA 
GGTCTTTTCT CAGCGCGTGG TTACAACATC GACACATTGA GTGTTGCACC AACTGAAGAT
CCATCTTTAT CTCGTATGAC GATTGTGACT TTTGGCTCCG ATGATGTTAT CGAGCAAATC
ACCAAGCATT TAAACCGTTT GGTTGAGGTG GTAAAGGTTT TTGATCTAAG CGAAGGCCCG
CATATTGAGC GTGAGCTTAT GATGATTAAG GTCCGCGCCG TAGGCAAAGA GCGTGAAGAG
CTCAAACGTA CTACTGATAT CTTTCGTGGT CGCATTATCG ATGTGACTGA CAAGAGCTAC
ACCATCGAGT TAACTGGCGA TGGTGCCAAA TTGGATGCCT TTATTGATTC GATCGATCGC
GCATCGATTC TGGAAACTGT CCGCTCGGGC GGCTCTGGAA TTGGTCGTGG TGAGCGTATC
CTCAAGGTTT AA
 
Protein sequence
MRHIISVLIE NEPGALSRVV GLFSARGYNI DTLSVAPTED PSLSRMTIVT FGSDDVIEQI 
TKHLNRLVEV VKVFDLSEGP HIERELMMIK VRAVGKEREE LKRTTDIFRG RIIDVTDKSY
TIELTGDGAK LDAFIDSIDR ASILETVRSG GSGIGRGERI LKV