Gene Pnec_0781 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnec_0781 
Symbol 
ID6183557 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolynucleobacter necessarius subsp. necessarius STIR1 
KingdomBacteria 
Replicon accessionNC_010531 
Strand
Start bp674262 
End bp675647 
Gene Length1386 bp 
Protein Length461 aa 
Translation table11 
GC content46% 
IMG OID641671418 
ProductPhosphomannomutase 
Protein accessionYP_001797610 
Protein GI171463497 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1109] Phosphomannomutase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones68 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAACTCT CTCCATCCAT TTTCAAAGCC TATGACATCC GCGGCATTAT TGATGAGACT 
TTAGATCCGT CAATTGCTAA ATTGATTGGC CAAGCATTTG GTACCGAGAT GCGCGAGTTA
GGTGAAACAG AAATTGTGAT TGGTCGCGAT GGTCGCCTAT CGGGTCCCAG CCTAATTGAA
GCATTAACCA AAGGATTGCT ATCTACCGGC ATTAATGTGA TTGACTTGGG TATGGTTGCT
ACACCGATGG TGTACTTTGG CGCCAACCAA ACACTCAATG GCAAAAAACC AAAGTCCGGC
ATTATGATCA CCGGTAGCCA TAACCCCCCT AACTACAACG GATTCAAAAT GGTATTAGGT
GGCGCAGCAA TATACGGCGA TCAAATTCAG GCGCTACGCA AACGCATTGA AGCCAAGAAA
TTTGCTACTG GTCAAGGCAG CAGAAGCACC TTTGATATTT TCTCAATGTA CCTAGAGCGC
ATTGTGGGTA ATGTGAAATT AGCCCGCCCC ATCAAGATTG CTGTCGACTG CGGCAATGGT
GTTGGCGGCG CCTTTGCAGG CAAACTCTTC AGAGCATTAG GCTGCGAAGT ACAGGAGCTC
TTTTGTGAAG TTGATGGTCA TTTTCCTAAC CACCACCCTG ACCCTGCGCA TATCGAGAAC
TTACAAGACC TCATTAGAAA CTTGCAAACC ACTGATAATG AATTAGGTCT TGCCTTTGAT
GGTGATGCCG ATCGATTAGG CGTGGTCACT AAAGATGGTC AGGTGATTTT CCCGGATCGT
CAAATGATGC TCTTTGCTAA GGATGTTCTT TCCCGTAACC CTGGCGGCCA GATTATTTAT
GACGTCAAAT GCACCAGGAA CCTTGCTACT TACGTGAAAA AACATGGTGG CGATCCATTG
ATGTGGAAAA CAGGCCACTC TCTAGTCAAA GCCAAACTCA AAGATACGGG TGCCCCTCTT
GCTGGTGAAA TGTCAGGCCA TATCTTCTTC AAAGACCGTT GGTTTGGTTT TGATGATGGC
CTGTATACCG GCGCACGTTT ATTGGAAATC CTCTCTAAAG AAAAAGATCC CAATAAAACC
CTCAATGACT TACCAAATGC GATCTGTACG CCAGAACTGC AATTAGCCTG TGCTGAAGGC
GAACCATTTG CCTTACTAGA AACCATCAAA GCGAACGCTA AGTTCCCCAC TTCAGAATCC
ATTAACACCA TTGATGGCGT CCGGGTGGAA TATGCTGATG GCTTTGGTTT AGCTAGACCT
TCAAACACCA CTCCAGTGGT CGTAATGCGC TTTGAGGCTG ATAGTGACGA GGCAATTGCC
CGCATTCAGG CAGAATTTAA GGCGGTTCTA CTAGCCGCTA AGCCAGACGC TAGGCTACCA
TTTTAA
 
Protein sequence
MQLSPSIFKA YDIRGIIDET LDPSIAKLIG QAFGTEMREL GETEIVIGRD GRLSGPSLIE 
ALTKGLLSTG INVIDLGMVA TPMVYFGANQ TLNGKKPKSG IMITGSHNPP NYNGFKMVLG
GAAIYGDQIQ ALRKRIEAKK FATGQGSRST FDIFSMYLER IVGNVKLARP IKIAVDCGNG
VGGAFAGKLF RALGCEVQEL FCEVDGHFPN HHPDPAHIEN LQDLIRNLQT TDNELGLAFD
GDADRLGVVT KDGQVIFPDR QMMLFAKDVL SRNPGGQIIY DVKCTRNLAT YVKKHGGDPL
MWKTGHSLVK AKLKDTGAPL AGEMSGHIFF KDRWFGFDDG LYTGARLLEI LSKEKDPNKT
LNDLPNAICT PELQLACAEG EPFALLETIK ANAKFPTSES INTIDGVRVE YADGFGLARP
SNTTPVVVMR FEADSDEAIA RIQAEFKAVL LAAKPDARLP F