Gene Pnec_0768 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnec_0768 
Symbol 
ID6183351 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolynucleobacter necessarius subsp. necessarius STIR1 
KingdomBacteria 
Replicon accessionNC_010531 
Strand
Start bp663273 
End bp664400 
Gene Length1128 bp 
Protein Length375 aa 
Translation table11 
GC content48% 
IMG OID641671408 
Productquinolinate synthetase 
Protein accessionYP_001797600 
Protein GI171463487 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0379] Quinolinate synthase 
TIGRFAM ID[TIGR00550] quinolinate synthetase complex, A subunit 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones65 
Fosmid unclonability p-value0.68917 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCTCAA CTGTTAGCGC CCCCATTTCT TTCGACTACC CCCAGCAAGA TGCCGCTGGC 
ACCACTTGCA CCACCCAGGC TTGGGTCAAG ACGCCTCCCC ACCTTGCTGA TGCCGATAAA
GTTGTTATTG TAAACCGAAT TAAACAACTT TTAGTGGAGA AAGATGCCAC TTTAGTTGCC
CACTACTATG TAGATGGCGA TATTCAGGAC TTAGCCTTAT CCACTGGCGG TTATGTTGCT
GATTCCCTTG AGATGGCGCG CTTTGGTAAA AACCATGCCG CCAAAAATTT AATCGTTGCT
GGGGTACGCT TCATGGGCGA AACCGCCAAG ATCCTCAGCC CTGAAAAAAG GGTGTTCATG
CCGGATCTGG ATGCAACTTG CTCTCTAGAT TTAGGCTGTG AGGCTACTGA CTTTGCCAAA
TTTCGCGCTT TGCATCCAGA TCGCGTTGTA GTGGTTTATG CAAATACTAG TGCAGCTGTA
AAAGCGCAAG CCGATTGGAT GGTCACCAGC TCATGCGCTT TAGCCATTGT TCATCAACTG
AAAGTTGAAG GAAAAAAAAT TCTATGGGCA CCAGATCGTC ACCTTGGTCG TTACATTCAA
GATCAAACAG GCGCAGATAT GTTGCTATGG AATGGCGCTT GTATTGTTCA TGATGAATTT
AAAGCGGTAG AGCTTGAGCT TCTGAAGGCA GCTCATCCTA ATGCCATGAT CTTGGTGCAC
CCTGAATCCC CACAAGCAGT AGTCGATCTC GCAGACGTTG TAGGTTCTAC CTCTGCCATG
ATTAAGGCTG TAGTAGAAGG CTCTGCTACC GAGTACATTG TTGCTACAGA TAAGGGCATC
TTGCATCGCA TGCAGCAACT AGCTCCGCAC AAAAAATTAA TTGAAGCGCC TACAGCCGGC
AATAGCGCCA CTTGCAAGAG TTGCGCGCAC TGCCCTTGGA TGGCCATGAA TGGCTTGCAA
GGTATTTTGC ATTGCCTAGA AAACGCCTCT GGCGAGATCT TGATTGAAGA ACCTGTTCGG
GCTGAGGCAT TGGGCTGTAT TGAACGTATG CTCGACTTCA CCAAGAGCCA CCCCGATCTC
TTAGCCAAAG CGCAGCATGG TTTTGTGAAG AACATTGGCG CAGCTTAA
 
Protein sequence
MTSTVSAPIS FDYPQQDAAG TTCTTQAWVK TPPHLADADK VVIVNRIKQL LVEKDATLVA 
HYYVDGDIQD LALSTGGYVA DSLEMARFGK NHAAKNLIVA GVRFMGETAK ILSPEKRVFM
PDLDATCSLD LGCEATDFAK FRALHPDRVV VVYANTSAAV KAQADWMVTS SCALAIVHQL
KVEGKKILWA PDRHLGRYIQ DQTGADMLLW NGACIVHDEF KAVELELLKA AHPNAMILVH
PESPQAVVDL ADVVGSTSAM IKAVVEGSAT EYIVATDKGI LHRMQQLAPH KKLIEAPTAG
NSATCKSCAH CPWMAMNGLQ GILHCLENAS GEILIEEPVR AEALGCIERM LDFTKSHPDL
LAKAQHGFVK NIGAA