Gene Pnec_0687 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnec_0687 
Symbol 
ID6182860 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolynucleobacter necessarius subsp. necessarius STIR1 
KingdomBacteria 
Replicon accessionNC_010531 
Strand
Start bp596829 
End bp597104 
Gene Length276 bp 
Protein Length91 aa 
Translation table11 
GC content46% 
IMG OID641671342 
Producthypothetical protein 
Protein accessionYP_001797537 
Protein GI171463424 
COG category[C] Energy production and conversion
[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG2924] Fe-S cluster protector protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value0.166712 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones67 
Fosmid unclonability p-value0.641044 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCACGCA TGGTTCAATG TATCAAACTC AACAAAGAGG CTGAAGGCAT GGATTTTGCC 
CCTCTTCCTG GAGAGCTGGG TAAAAGGATT TGGAACCAAG TTTCTAAAGA AGCTTGGGCC
GGTTGGCTAA AGCAGCAAAC CATGTTGATT AATGAAAATC GTCTCAATAT GGCAGACCCA
CGTGCACGCC AATACCTCTT AAAGCAGGTA GAAAAGCATT TCTTTGAAGG TGGCGCAGAT
ACTGCACAAG GGTACGTACC ACCACCAGCG GAATAA
 
Protein sequence
MARMVQCIKL NKEAEGMDFA PLPGELGKRI WNQVSKEAWA GWLKQQTMLI NENRLNMADP 
RARQYLLKQV EKHFFEGGAD TAQGYVPPPA E