Gene Pnec_0646 details

Gene Information

• Locus tag: Pnec_0646
• Symbol: recR
• ID: 6183202
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Polynucleobacter necessarius subsp. necessarius STIR1
• Kingdom: Bacteria
• Replicon accession: NC_010531
• Strand: +
• Start bp: 560531
• End bp: 561145
• Gene Length: 615 bp
• Protein Length: 204 aa
• Translation table: 11
• GC content: 52%
• IMG OID: 641671309
• Product: recombination protein RecR
• Protein accession: YP_001797505
• Protein GI: 171463392
• COG category: [L] Replication, recombination and repair
• COG ID: [COG0353] Recombinational DNA repair protein (RecF pathway)
• TIGRFAM ID: [TIGR00615] recombination protein RecR

Plasmid Coverage information

• Num covering plasmid clones: 34
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: 82
• Fosmid unclonability p-value: 1
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

ATGGCGCGTA TAGAAGCACC TCAAGATGCA CTTGGTCGTT TGATTGAGGC ATTACGTGTG 
CTTCCTGGAG TAGGCCCTAA GTCTGCTCAG CGTATGGCGT TCTATCTGTT GCAGCATGAT 
CGCAATGGTG CTGCAGTGCT TGCTCAATCA TTGGGTGAGG CGGTAGAGAC AGTGGGGCAC 
TGCGCTTGTT GTAACACGTT TTCAGAAACA CAGGTCTGCA GTACATGCTC TGACGAGCGT 
CGCGATCCAT CGCTGTTGTG CATTGTGGAA ACGCCTGCTG ATCAGGTGAT GGTGGAGCAA 
ACCTTAAGCT TTAAAGGCAA CTACTTTGTA TTGATGGGGC GACTCTCACC TCTCGATGGC 
ATGGGCCCAA ATGAGATCAG CTTTGATCGC TTACTCAATC GTATTGAGAC TCCCGATACT 
GGGGTTCCTA TTCGAGAAGT GGTGTTGGCC ACGAATTTCA CTAGTGAAGG TGAGGCAACG 
GCCCATTACA TCGGCGAAGT GCTGAAGCCC AAAGGCATCA AGGTCACCCG TATTGCACGC 
GGCATTCCGG TGGGTGGTGA GCTCGAATAT GTTGATGCCG GCACGCTAGC TCGCGCCTTA 
ATGGATCGTC GCTAA 

 

Protein sequence

MARIEAPQDA LGRLIEALRV LPGVGPKSAQ RMAFYLLQHD RNGAAVLAQS LGEAVETVGH 
CACCNTFSET QVCSTCSDER RDPSLLCIVE TPADQVMVEQ TLSFKGNYFV LMGRLSPLDG 
MGPNEISFDR LLNRIETPDT GVPIREVVLA TNFTSEGEAT AHYIGEVLKP KGIKVTRIAR 
GIPVGGELEY VDAGTLARAL MDRR