Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pnec_0640 |
Symbol | |
ID | 6183705 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polynucleobacter necessarius subsp. necessarius STIR1 |
Kingdom | Bacteria |
Replicon accession | NC_010531 |
Strand | + |
Start bp | 550837 |
End bp | 553812 |
Gene Length | 2976 bp |
Protein Length | 991 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 641671303 |
Product | inactivated superfamily I helicase-like protein |
Protein accession | YP_001797499 |
Protein GI | 171463386 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG3893] Inactivated superfamily I helicase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 67 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCTCGGC CTTTCCCCAC CATTTCTGAC CAAAAGCAGC CACAAGCTTG GGCAATCACG CCCAACAGCC AAGCGCTCGC CCAATTGGCA AGGGGTGTTT GGGATTGTGC AGTGCAAACG AATCAACGCC CCTTGGTGGT GCTTAGTACT GCTGGACCGC TCATTGGGGT AAGAGCGATC TTAGAGCAAA ACCGACCGAA AGACCTACTA AGCAGTATTG CCTTCTTGCC TCAGGTAATT AGTTTCACAG ATTGGCTAGA AGCAGCACCC GGCGCCTGGA AGTTTCCGAA GAAGCAAAGT GATTTGGAGA GATGGCTGGG TGTTTATGCC ACTTTGCGTA AACATAAAAA TTTACAAGCG TGGTTTAAGG CAGAGACTGA GTCTGGCGCA TGGGGTTTGG CCCAAGCAAT TGTGAAGGCG TGTGACACCT TATCAACAGC AGTGAGTTCG CAAGTGCAAA AACAGATTCT TGGGTTCATT CAGAAAAATC AAGCTGAAAC AAGCAATCTT GGTGAGCTTT GCCTTAGTGA GGCGCAAGCA TCATTAGATA GTACTGTTGC CAAAGTCTAT TCAGGCATGG CGTGCAAAAT AGTAGATCAA GAGACTAAAG TCTTACTCGA GTTTTGGCGT TACACTGCAA GCGTGAGTGA CCCCGCATTT CGTAATCAAT TTGCAATAGC CACTCATCTT GAAGCAATTA AGAGTGCAAA TCCAGCAAGG CCATTAATAT GGGTGGAGAC TGCTGATCCA ACACCAATAG ACCAAGAGAT TATTGGGGCG CTTCTTAATG AGTATGCTCA ATACGCACCA GTAATAGAGG TAAAGATGGA TTGGCATGAC GTGGGCTTAT GGTCTGAGTC TATTGGGGCT GAAGATGGTG ATCAAGCAAG AACTCAAGCG TTAGAAAATG TAAAGCGCAC TCAAAATAAG GGCTGGCGAC TTATAGCCGC AAAACGTTTT GAAGAATTGG CATGGGCTGC TGCCAAAACA ATTGAGCAAC ATCTCATTAA TGGCAAAACC AATTTAGCAT TGGTTGCACA AGATCGTTTG GTGGCGAGAA GGGCGCGCGC GTTACTCTCA CGCCTAGGTC CAGCACTCAA TATTCGTGAT GAAACTGGCT GGAAGTTATC CACGACTCGT GCAGCTGCAG CGCTTAATAG TTGGCTGGAA CTCATCAAAG CTCCTAAAGA TGGACCGAGC GCCAAAACCT TGCTTGAGTT TTTACAGAAT CCTTTTTTAG ATCTTGGCAA GATTTTGAAT CGAGATGCAG AAGCCTGCAT TGGGCTGATT GCAGGGCTTG AAGATATTTT AGTTGGCAGC AAAGCAGAGT CTGGCTGGAA AACCTTTCAC ATAGCCATTG AGGGGGCGCA AGTGAATGCG GCAAAAAATG CTAGCGCGAT GCCAGGTACA GTATTGTTTG AGTTATTGCA GTTTGCTCGA GAGCGTCATC ATGAGTGGCT GACGCTTCAG GTTGATTGCA ATAAGGCCTA TCAGCTGTTA CAGGTCAATC TTCAAGCGAC TGGCATGGCT CAAAGTCTTG AAAAAGATTC GGCCGGCAAG CAATTGCTGG AGGTGCTCAA GACATTTGAT TTGAGTAAGA CGCAATACCA GCAAACCTCT GTACGTTTAA GCGAGTGGCT TAGTTTGCTT AAAACAGTGA TTGAAGGCGC GAGCTATCAA GAAGCTGGCA AAGAAGCCAA AGCCACACTG AGCATTTTGC CTTTGAGCTC TACACGTATG CGTGACTTTG AAGCAGTGGT TGTTGTAGGT TGCGATGAGC AGCAGTTGCC AGCCTATTCA GAGCCGCCAT TATTTTTCTC AGATGCACTT AATCAGCTAT TAAAGACCTC AACAATAGCA ATGCAGTTTG TGCAGCAATC TAGAGATCTT TCGCAATTGC TAGTGTCATG CCCCAGCGTG GATTTGCTCT GGCAAAGCAA AAGCAATAAT GGAGAACCGC TCAGACCATC GGCTTGGATA CAGCGTTTAC AAAATCAAGT TGAGTGGGAG GCTATTCCTG TTCAATTGAA AAAACGCGCT TTTGAGGCAA CACCAATGGT AATGACAGTA GCGCATTTTG AAGAAGATCT GCCGATGCCG TTATCAATGA GTCCCAGTGC CTATAAGGCT TTGCGGGATT GCCCATATCG TTATTACGTA CGTAGCTTAT TGAGCTTACG CAAAAATAAA GAATTTGATG AAGGCTTTGA TGCTTCACTT GCAGGACAAA CTTTACACAA GTTGCTTAAA CGTTTTTACC ATGCACTTAA AACCCATGAG CTCACTAATC CATCTCTTAA GACTGATGAA GATCAAAGAC GCGCCTGGAT GGAGCAAAGC TTAAATGATT ATTCAGAGCA AGAGTTCGCC GCTTTGATTG AGGGTGATGC GAGGGTCATG GGTACATTAA GAGATTGGCA AAAACAAATA CCGAGTTTTA TAGATTGGCA GTTGCAGCGT GAGCAAGCGG GTTGGGAATA TTTTGATGGC GAAGTCAAGG TTGGTTTTAA TCTGCCATTT CAGGATGCTG ACGGCAATAT CAAAATGATT CGTATTGAAG GATATGCCGA TCGCTATGAT GTCAATGTAG ATAACAGCAA GATTGCTTCG GTGATTGATT ACAAAAATCA ACGCTTTGAA AAAGTCAAAG CGCGGGCTGA ACATATCTTG GATGATCCGC AGTTATTAAT CTACGCCAAG GCTGCCAATG AGGAGCAGGA AAGCAATAAG TTAACAGGGT ATCAGGTCCA GCAGGCAGAG TGGGTGGCCT TGAAGGCAGA TATCTCCAAG GGTGAGCAAA AGGCTGTACG CAGCCAAGAG GTAGCCGATA TGCCAGCAAT AATGCGGCAG TTCACCGTGC AAATGACGGA AGATGTCGAG CAACTCTGGG CTAAAAAGCC AATGCAAGCA TTTGCTCCTG AAGGCATCTG TCAATACTGC GAAGCAAGGG GTATTTGCAG AAAGGGGATT TGGTGA
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Protein sequence | MPRPFPTISD QKQPQAWAIT PNSQALAQLA RGVWDCAVQT NQRPLVVLST AGPLIGVRAI LEQNRPKDLL SSIAFLPQVI SFTDWLEAAP GAWKFPKKQS DLERWLGVYA TLRKHKNLQA WFKAETESGA WGLAQAIVKA CDTLSTAVSS QVQKQILGFI QKNQAETSNL GELCLSEAQA SLDSTVAKVY SGMACKIVDQ ETKVLLEFWR YTASVSDPAF RNQFAIATHL EAIKSANPAR PLIWVETADP TPIDQEIIGA LLNEYAQYAP VIEVKMDWHD VGLWSESIGA EDGDQARTQA LENVKRTQNK GWRLIAAKRF EELAWAAAKT IEQHLINGKT NLALVAQDRL VARRARALLS RLGPALNIRD ETGWKLSTTR AAAALNSWLE LIKAPKDGPS AKTLLEFLQN PFLDLGKILN RDAEACIGLI AGLEDILVGS KAESGWKTFH IAIEGAQVNA AKNASAMPGT VLFELLQFAR ERHHEWLTLQ VDCNKAYQLL QVNLQATGMA QSLEKDSAGK QLLEVLKTFD LSKTQYQQTS VRLSEWLSLL KTVIEGASYQ EAGKEAKATL SILPLSSTRM RDFEAVVVVG CDEQQLPAYS EPPLFFSDAL NQLLKTSTIA MQFVQQSRDL SQLLVSCPSV DLLWQSKSNN GEPLRPSAWI QRLQNQVEWE AIPVQLKKRA FEATPMVMTV AHFEEDLPMP LSMSPSAYKA LRDCPYRYYV RSLLSLRKNK EFDEGFDASL AGQTLHKLLK RFYHALKTHE LTNPSLKTDE DQRRAWMEQS LNDYSEQEFA ALIEGDARVM GTLRDWQKQI PSFIDWQLQR EQAGWEYFDG EVKVGFNLPF QDADGNIKMI RIEGYADRYD VNVDNSKIAS VIDYKNQRFE KVKARAEHIL DDPQLLIYAK AANEEQESNK LTGYQVQQAE WVALKADISK GEQKAVRSQE VADMPAIMRQ FTVQMTEDVE QLWAKKPMQA FAPEGICQYC EARGICRKGI W
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