Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pnec_0639 |
Symbol | |
ID | 6183944 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polynucleobacter necessarius subsp. necessarius STIR1 |
Kingdom | Bacteria |
Replicon accession | NC_010531 |
Strand | - |
Start bp | 550402 |
End bp | 550728 |
Gene Length | 327 bp |
Protein Length | 108 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 641671302 |
Product | thioredoxin |
Protein accession | YP_001797498 |
Protein GI | 171463385 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG3118] Thioredoxin domain-containing protein |
TIGRFAM ID | [TIGR01068] thioredoxin |
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Plasmid Coverage information |
Num covering plasmid clones | 41 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 72 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGTGCCG GCATTAAATA TGTAACTGAC GCCTCTTTCG AACAAGACGT CCTCAAGTCC GATAAACCTG TTCTGCTCGA CTTCTGGGCT GAGTGGTGCG GTCCTTGCAA AATGATTGGT CCAATTCTGG AAGAGCTCGC TGGCGAGTAT GGCGACAAGC TACAGATCGC AAAAATGAAC GTTGATGAGA ACCAAGGCGT ACCTGCCCAG TTAAATATTC GCGGCATTCC CACCTTAATC CTCTTTAAAA ATGGCACTGT GGCTGCTCAA AAAGTAGGCG CTTTGGCCAA ATCCCAGTTG ACCGCATTTA TTGATAGTCA TCTGTAA
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Protein sequence | MSAGIKYVTD ASFEQDVLKS DKPVLLDFWA EWCGPCKMIG PILEELAGEY GDKLQIAKMN VDENQGVPAQ LNIRGIPTLI LFKNGTVAAQ KVGALAKSQL TAFIDSHL
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