Gene Pnec_0639 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnec_0639 
Symbol 
ID6183944 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolynucleobacter necessarius subsp. necessarius STIR1 
KingdomBacteria 
Replicon accessionNC_010531 
Strand
Start bp550402 
End bp550728 
Gene Length327 bp 
Protein Length108 aa 
Translation table11 
GC content47% 
IMG OID641671302 
Productthioredoxin 
Protein accessionYP_001797498 
Protein GI171463385 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG3118] Thioredoxin domain-containing protein 
TIGRFAM ID[TIGR01068] thioredoxin 


Plasmid Coverage information

Num covering plasmid clones41 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones72 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTGCCG GCATTAAATA TGTAACTGAC GCCTCTTTCG AACAAGACGT CCTCAAGTCC 
GATAAACCTG TTCTGCTCGA CTTCTGGGCT GAGTGGTGCG GTCCTTGCAA AATGATTGGT
CCAATTCTGG AAGAGCTCGC TGGCGAGTAT GGCGACAAGC TACAGATCGC AAAAATGAAC
GTTGATGAGA ACCAAGGCGT ACCTGCCCAG TTAAATATTC GCGGCATTCC CACCTTAATC
CTCTTTAAAA ATGGCACTGT GGCTGCTCAA AAAGTAGGCG CTTTGGCCAA ATCCCAGTTG
ACCGCATTTA TTGATAGTCA TCTGTAA
 
Protein sequence
MSAGIKYVTD ASFEQDVLKS DKPVLLDFWA EWCGPCKMIG PILEELAGEY GDKLQIAKMN 
VDENQGVPAQ LNIRGIPTLI LFKNGTVAAQ KVGALAKSQL TAFIDSHL