| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnec_0633 |
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| Symbol | |
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| ID | 6183242 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polynucleobacter necessarius subsp. necessarius STIR1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010531 |
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| Strand | + |
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| Start bp | 543464 |
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| End bp | 544054 |
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| Gene Length | 591 bp |
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| Protein Length | 196 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 641671296 |
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| Product | membrane lipoprotein lipid attachment site |
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| Protein accession | YP_001797492 |
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| Protein GI | 171463379 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG3417] Collagen-binding surface adhesin SpaP (antigen I/II family) |
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| TIGRFAM ID | [TIGR02722] uncharacterized proteobacterial lipoprotein |
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Plasmid Coverage information |
| Num covering plasmid clones | 33 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 70 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACTATGA ACACTAAAAC CATTTATTTA TCTGCCATTA TTTTGGCTGT GGCCGCTTTG
ACTGCCTGCT CTGGACCGCA GGTGCGATAT GGTGATGCAA AGGCTGTTGA GACAGTGAAT
GCCAATTATG GCTCTACCGA TCTGCAGATG ATTGCTGAGG CGATGACAAG ATCATTACTG
CAATCAAAAG CAATTTCTGG AAGCAAGGGT GCGCCAATTG TGACCTTGGC AGACGTAAAG
AACAAAACTT CTGAATATAT CGATACGCGC GTGATTACCG ATAAGATTCG TACACAATTG
ATGAAGAGTG GTCAGGTGCG ATTTGCCGTG AGCGTCTCGG AGATGCAAAA TCAAACAGAC
GAACTCAAGC GTCAAAATCA ATCAGGACTA TATAAGAACA ATACGATTGC TAAGATAGGC
AATATGCAGG GTGCTCAGTA CCGTATTGAG GGCTCAATCG CATCTATTGT CAAAAATACT
AAAGATGTGA AAGATGTTTA TTACGTCTTT AATTTGAATC TGATTAATAA CGAGTCTGGT
TTGCTCGAAT GGGCTGACGA AAAAGAGATT CGTAAGACTT CAACACGCTA A
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| Protein sequence | MTMNTKTIYL SAIILAVAAL TACSGPQVRY GDAKAVETVN ANYGSTDLQM IAEAMTRSLL
QSKAISGSKG APIVTLADVK NKTSEYIDTR VITDKIRTQL MKSGQVRFAV SVSEMQNQTD
ELKRQNQSGL YKNNTIAKIG NMQGAQYRIE GSIASIVKNT KDVKDVYYVF NLNLINNESG
LLEWADEKEI RKTSTR
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