| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnec_0560 |
|---|
| Symbol | |
|---|
| ID | 6183912 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Polynucleobacter necessarius subsp. necessarius STIR1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010531 |
|---|
| Strand | + |
|---|
| Start bp | 496664 |
|---|
| End bp | 497752 |
|---|
| Gene Length | 1089 bp |
|---|
| Protein Length | 362 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 45% |
|---|
| IMG OID | 641671235 |
|---|
| Product | protein of unknown function DUF59 |
|---|
| Protein accession | YP_001797431 |
|---|
| Protein GI | 171463318 |
|---|
| COG category | [D] Cell cycle control, cell division, chromosome partitioning |
|---|
| COG ID | [COG0489] ATPases involved in chromosome partitioning |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 36 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 84 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGTCGTTTA CACCGGAATT GGTACAAGCA GCCCTTAAAA ACTTAGTCGC CCCTAATACC
AGGGTTGATT TTGTTACTGC AAAAAATATT AAAAATCTTC GTGTAGAAGA AGGTGATATT
TCCTTGGATC TTATTTTGGG ATATCCGGCC AAGAGTCAGT TTGACTCTAT TCGTAAATCG
GTTATTAATG CTTTGCGTGA ACTGTCCGGC GTTAAGAATG TCAGTGTCAA TGTAAGCAGT
CAGATTGTTG CTCATGCGGT GCAGCGTGGT GTGAAGCTTT TGCCTGGCGT AAAAAATATT
ATTGCAGTCG CCAGCGGTAA GGGTGGGGTA GGTAAATCGA CAACGGCAGT CAATTTAGCC
TTGGCTCTTT CTGCTGAGGG CGCGCAGGTT GGAATTTTGG ATGCAGATAT CTACGGCCCA
AGTCAGCCAA TGATGTTGGG AATCACTGGC AGACCGAACT CTCTTGAAGA AAATACAATT
GAGCCGATGG AAGCATATGG CTTGCAGGCG AGTTCAATTG GTTTTCTGAT TGATGATGAT
GCGCCGATGG TGTGGCGTGG TCCGATGGTG ACTTCTGCGC TTGAGCAACT ACTTCGTCAG
ACTCGTTGGC GTGATTTGGA TTATCTAATT GTTGATATGC CACCAGGCAC CGGCGATATT
CAACTGACCT TGGCGCAAAA AGTTCCTGTT ACAGGTTCCG TGATTGTGAC AACACCTCAA
GACATTGCTT TGCTTGATGC CCGCAAAGGC CTAAAAATGT TTGAGAAGGT TGGCGTACCT
ATCATTGGCA TTATTGAAAA CATGAGCACT TACGTTTGCA CAAAATGTGG GCACGAAGAG
TATGTATTTG GTATTGGTGG CGGTGAAAAG ATGTGCGCAG AATATAAAGT GGACTTCTTG
GGATCATTGC CTCTGAATTT GTCTATTCGT GAGCAAGCTG ATGCTGGTCG CCCTGCAGTG
GTTGCAGATC CTGACGGCGC AATCAGTGCA ATTTATAAAG GCATTGCTAG ACAGGTTGCC
ATCCGTGTTG CTACTCTATC CAAAGATATG AGCAGTAAAT TCCCGAACAT TGTGGTTCAA
AACACCTGA
|
|---|
| Protein sequence | MSFTPELVQA ALKNLVAPNT RVDFVTAKNI KNLRVEEGDI SLDLILGYPA KSQFDSIRKS
VINALRELSG VKNVSVNVSS QIVAHAVQRG VKLLPGVKNI IAVASGKGGV GKSTTAVNLA
LALSAEGAQV GILDADIYGP SQPMMLGITG RPNSLEENTI EPMEAYGLQA SSIGFLIDDD
APMVWRGPMV TSALEQLLRQ TRWRDLDYLI VDMPPGTGDI QLTLAQKVPV TGSVIVTTPQ
DIALLDARKG LKMFEKVGVP IIGIIENMST YVCTKCGHEE YVFGIGGGEK MCAEYKVDFL
GSLPLNLSIR EQADAGRPAV VADPDGAISA IYKGIARQVA IRVATLSKDM SSKFPNIVVQ
NT
|
|---|
| |