| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnec_0558 |
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| Symbol | |
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| ID | 6183619 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polynucleobacter necessarius subsp. necessarius STIR1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010531 |
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| Strand | + |
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| Start bp | 494865 |
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| End bp | 495512 |
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| Gene Length | 648 bp |
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| Protein Length | 215 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 641671233 |
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| Product | protein of unknown function DUF47 |
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| Protein accession | YP_001797429 |
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| Protein GI | 171463316 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1392] Phosphate transport regulator (distant homolog of PhoU) |
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| TIGRFAM ID | [TIGR00153] conserved hypothetical protein TIGR00153 |
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Plasmid Coverage information |
| Num covering plasmid clones | 32 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 83 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTCTTCA GCAAGTTAAT GCCTCACGAT GGTAATTTCT TCGAGCTATT TAACGAGCAC
GCTAGCAATA TCGTCTCCGC CTCCGAATCT TTCTTAAAGT TCGTTGAGCA CTACAACGAT
GAAGCTCTCC GCGCCAAATA TACCCAAGAC GTCGATAAAG CAGAGCATGC TTGTGATGAT
GTAGTGAAAG AGGTACATCG TCGTCTGCAT AAAACTTTCA TTACCCCAAT CGATCGCGAC
CAAATTTTTT CACTCATCAA TACGATGGAT GACGTTGCTG ATTTATTGCA AAACGGTACA
GAAGCAATGC ATCTATACGA TGTAAAGCAA ATGACCCCAG AAATGGTGCA AATGGCAGAG
CTTTGCAATC AGTGTTGCAT CAGTATGAAA AATGCAGTTA CCACATTAAA AGACATCTCT
GATCCTGAGG TGGCTAAAGC CGCATTAAAG ACTTGTGATG AGATTGATCA TTTAGAGTCT
GGGGCTGATC GCCTTCTATC TACTGCGATT ACTAGATTGT TCCGCGAGGA TATCGAGGTG
CGCGAGCTCA TTAAGTGTCA GCGTATTTAT GAATTGCTCG AGGAAGTTAC CGATAAATGT
GAAAACGTTG CCAATTTGGT TGAAGGCATC GTTCTTGAAA ACTCTTAA
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| Protein sequence | MFFSKLMPHD GNFFELFNEH ASNIVSASES FLKFVEHYND EALRAKYTQD VDKAEHACDD
VVKEVHRRLH KTFITPIDRD QIFSLINTMD DVADLLQNGT EAMHLYDVKQ MTPEMVQMAE
LCNQCCISMK NAVTTLKDIS DPEVAKAALK TCDEIDHLES GADRLLSTAI TRLFREDIEV
RELIKCQRIY ELLEEVTDKC ENVANLVEGI VLENS
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