| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnec_0542 |
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| Symbol | |
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| ID | 6184394 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polynucleobacter necessarius subsp. necessarius STIR1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010531 |
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| Strand | + |
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| Start bp | 483845 |
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| End bp | 484303 |
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| Gene Length | 459 bp |
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| Protein Length | 152 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 641671222 |
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| Product | CMP/dCMP deaminase zinc-binding |
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| Protein accession | YP_001797418 |
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| Protein GI | 171463305 |
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| COG category | [F] Nucleotide transport and metabolism
[J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0590] Cytosine/adenosine deaminases |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 0.600523 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 77 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGACGCAAG CTGCGCTTGA TCAGCAATAT ATGCGCATGG CAATTGAGCA AGCTCAGTTG
GCGGCGCAAG CAGGCGAGGT TCCTGTGGGT GCAGTATTGG TTAAGGATGG CCAGGTGATT
GCAAAAGCAT TTAATAAGCC AATTGCAAAT CATGATCCCA GTGCTCACGC AGAAATGTTG
GCTTTGCGAG AAGCGGCGTT AGCCCAAGAA AACTATCGCA TTCCTGGCAG TACTTTATAT
GTCACTTTAG AGCCGTGTGC AATGTGCTCA GGTGCTATGC TCCATGCTAG GATTGACCGT
GTGGTCTTTG GTGCGCCTGA TCCTAAGACG GGTGCTGCAG GCAGCGTGCT CGACTTATTT
GCTTCTAAGC AAATCAATCA TCAGACCAGC GTAGAAGGTG GCATCATGAG TGAAGAGTGT
GGTCAGCTAT TGCGTGATTT TTTTAAGAGA CGACGTTGA
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| Protein sequence | MTQAALDQQY MRMAIEQAQL AAQAGEVPVG AVLVKDGQVI AKAFNKPIAN HDPSAHAEML
ALREAALAQE NYRIPGSTLY VTLEPCAMCS GAMLHARIDR VVFGAPDPKT GAAGSVLDLF
ASKQINHQTS VEGGIMSEEC GQLLRDFFKR RR
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