Gene Pnec_0533 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnec_0533 
Symbol 
ID6184465 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolynucleobacter necessarius subsp. necessarius STIR1 
KingdomBacteria 
Replicon accessionNC_010531 
Strand+ 
Start bp480808 
End bp481224 
Gene Length417 bp 
Protein Length138 aa 
Translation table11 
GC content43% 
IMG OID641671213 
Productradical SAM domain protein 
Protein accessionYP_001797409 
Protein GI171463296 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones78 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACCAAAG GTTTCTCGGA TGCTGGCATT TTGGTGCATG CCTATCTGAT GTATGGTTTT 
CCAACTCAAA CAGTACAAGA GACCATCGAT GCCCTGGAGT ATGTAAAACA ACTTTTTGAG 
GCTGGCTGTA TTCAGAGTGG CTTCTTTCAT CGTTTTATTT GTACGGTTCA CTCACCAGTG 
GGGCTAAATC CCCAAGAGTA TGGTGTTGAA TTGGTGCCAT TGCCCCAAAT TACGTTTGCC 
AAAAATGATG TGGCCTTTAT TGATCCTAAT GGGGCAGATC ACGATGCATT AGGCCAAGGC 
TTAAAAAGGC CATCTACAAC TACATGCATG GGGTTGGATT TGATATTGAA GTCCGCGCTT 
GGTTTAAAGG TTTGGGTATT AGTATTCCCA AGACAACGGT ACCTAGAAAT TTCATAG
 
Protein sequence
MTKGFSDAGI LVHAYLMYGF PTQTVQETID ALEYVKQLFE AGCIQSGFFH RFICTVHSPV 
GLNPQEYGVE LVPLPQITFA KNDVAFIDPN GADHDALGQG LKRPSTTTCM GLDLILKSAL 
GLKVWVLVFP RQRYLEIS