Gene Pnec_0519 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnec_0519 
Symbol 
ID6182984 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolynucleobacter necessarius subsp. necessarius STIR1 
KingdomBacteria 
Replicon accessionNC_010531 
Strand
Start bp469731 
End bp470528 
Gene Length798 bp 
Protein Length265 aa 
Translation table11 
GC content45% 
IMG OID641671200 
ProductUDP-N-acetylglucosamine acyltransferase 
Protein accessionYP_001797396 
Protein GI171463283 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1043] Acyl-[acyl carrier protein]--UDP-N-acetylglucosamine O-acyltransferase 
TIGRFAM ID[TIGR01852] acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones65 
Fosmid unclonability p-value0.604475 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTCGAA TTCATGCATC TGCTGTAGTA GATAGCAAAG CCGAATTGGC TGGTGATGTT 
GAGATTGGTC CTTATTCTGT AATCGGACCT AATGTCAAAA TTGGTGCAGG AACCAAGGTT
GGTTCTCACA CTGTTATTGA GGGCTACACC ACTATCGGTA AAGAGAATAA TTTTGCTCAC
TTTGCTGCCA TCGGTGGTCC TCCTCAAGAT ATGAAATACC GTGGCGAACC AACCCAGTTG
ATTATTGGTG ATCACAATAC TGTTCGGGAA TTTACAACTA TCCATACCGG CACGTCGCAA
GACGAAGGTA TTACACGCAT TGGTAATAAC AATTGGATCA TGGCTTATGT ACATATTGCC
CATGACTGCC AAGTTGGCAA TCATACGATT TTCTCAAGTA ATGCACAAAT TGCTGGTCAC
GTACAGGTAG ATGATTGGGT CATTATGGGC GGCATGTCTG GAGTGCATCA GTTTGTTCGC
GTTGGTCAAC ATGCCATGCT GGGTGGTGCT TCCGCATTGG CGCAAGATAT CCCACCATTT
GTGATTGCTG CTGGTGATAA GGCATCTCCT CACGGTATTA ATGTTGAGGG ATTAAAGCGT
CGTGGATTCT CAAGCGAAAC CATTTCTGCT TTGCGTCAAG CATATAAAGT TCTCTACAAA
GATGGCTTTA GCTTTGAAGA AGCTAAAGTA GAGATTCAGA AGATGGTTGC CGCTTCTGCA
GCTGACGCTG CTACCGCTGA AAAGTTGTCT CAATTCCATG ACTTTATTGC TGCCTCTACT
CGCGGCATTA TTCGGTAA
 
Protein sequence
MTRIHASAVV DSKAELAGDV EIGPYSVIGP NVKIGAGTKV GSHTVIEGYT TIGKENNFAH 
FAAIGGPPQD MKYRGEPTQL IIGDHNTVRE FTTIHTGTSQ DEGITRIGNN NWIMAYVHIA
HDCQVGNHTI FSSNAQIAGH VQVDDWVIMG GMSGVHQFVR VGQHAMLGGA SALAQDIPPF
VIAAGDKASP HGINVEGLKR RGFSSETISA LRQAYKVLYK DGFSFEEAKV EIQKMVAASA
ADAATAEKLS QFHDFIAAST RGIIR