| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnec_0518 |
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| Symbol | fabZ |
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| ID | 6184563 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polynucleobacter necessarius subsp. necessarius STIR1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010531 |
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| Strand | + |
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| Start bp | 469282 |
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| End bp | 469731 |
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| Gene Length | 450 bp |
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| Protein Length | 149 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 641671199 |
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| Product | (3R)-hydroxymyristoyl-ACP dehydratase |
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| Protein accession | YP_001797395 |
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| Protein GI | 171463282 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG0764] 3-hydroxymyristoyl/3-hydroxydecanoyl-(acyl carrier protein) dehydratases |
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| TIGRFAM ID | [TIGR01750] beta-hydroxyacyl-[acyl carrier protein] dehydratase FabZ |
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Plasmid Coverage information |
| Num covering plasmid clones | 42 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | 66 |
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| Fosmid unclonability p-value | 0.661258 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAGTACAC CAATCGCAAT CGACATTAAT AAGATTCTTA AATTGTTACC GCATCGCTAC
CCATTTTTGT TGGTAGATCG TGTATTGGAA ATCTCTCCGC GTGAAAGTAT TACCGCATTA
AAGAATGTCA CTATGAATGA GCCATTTTTT CAGGGCCATT TTCCTGGCTT CCCAATGATG
CCCGGAGTGC TCATCATTGA AGCCCTAGCA CAAACAGCTG CTTTATTAAC TTTCTCAGAT
GAGCGTGCAG AGGATGCGAT TTACTACTTC GCAGGTATTG ATGGTGCTCG TTTTAAAAAG
CCGGTGCTAC CTGGTGACCA GTTGATCATG ACTGCGAAGT TAGAGCGCGA CCGTGCGGGT
ATATATAAGT TTGCGGTTCA GGCAACTGCT GATGGTGAAA TTGCTGCAGA AGCGAATATC
ACCTGTGCGG TTCGTACGAA AGGCGCGTAA
|
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| Protein sequence | MSTPIAIDIN KILKLLPHRY PFLLVDRVLE ISPRESITAL KNVTMNEPFF QGHFPGFPMM
PGVLIIEALA QTAALLTFSD ERAEDAIYYF AGIDGARFKK PVLPGDQLIM TAKLERDRAG
IYKFAVQATA DGEIAAEANI TCAVRTKGA
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