| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnec_0517 |
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| Symbol | lpxD |
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| ID | 6183148 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polynucleobacter necessarius subsp. necessarius STIR1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010531 |
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| Strand | + |
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| Start bp | 468168 |
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| End bp | 469235 |
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| Gene Length | 1068 bp |
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| Protein Length | 355 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 641671198 |
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| Product | UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase |
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| Protein accession | YP_001797394 |
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| Protein GI | 171463281 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1044] UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase |
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| TIGRFAM ID | [TIGR01853] UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 37 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 64 |
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| Fosmid unclonability p-value | 0.537344 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCCACCG CCATCGAGCT GGCCGAACAG TTTCAAGCAA GCTTGGTGGG GGAGGCTCCA
CATGGATTTA CCGGCCTCGC TCCATTGGAG CGAGCTCAGT CGAACCAAAT ATCCTTTTTA
TCCAATTTGC TTTACCGACA GCAAGCTAGC GAGAGCGCTG CTGGCGCATT AATTGTGAGT
CAATCAGACT TAGATTTTTT GCAGGCCAAT CCTGGTGCAA ATTCTGTCAA GCGCGTTTAT
TTTGTCGCCA AAAATCCTTA CACTACATTT GCCAGAATGG CTCAGTACTT TGCTAAAGCA
AATGACCCCA TTTATGCATC CGGAATACAT CCAAGTGCAG TAATTGACTC TACAGCTATT
GTTCCGCCTT CATGCCACAT TGGTCCATTT GTACAAATTG GTGCTGGCGT GAAACTTGGT
GAGCGTGTTT CTATTTTGGG TAATTCCAGC ATTGCAAAAG ACAGCGTGAT TGCAAGCGAT
ACCTTAATTT ACCCATCGGT TTCGATTTAT CACAATACTC AAATTGGCGA GCGTTGCATT
ATTCATAGTG GCGCAGTCAT TGGCGCTGAT GGCTTTGGTT TTGCTCCTGA CTTTTCTGCG
ACTGGCGGTG AATGGGTCAA GATTCCACAA ACTGGACGCG TTGTCATCAG CAATGATGTT
GAGATTGGCG CCTCAACCAC GATTGATCGT GGGGCAATGA GTGATACCGT GATTGGCGCA
GGCACTAAGA TTGATAATCA AGTGCAAATT GCCCACAACG TGATTGTAGG TAGCTGCTGT
GTGATTGCTG GATGCGCTGC AATTTCTGGA AGTACCAAGA TCGGCAATTT CTGCATTATT
GGGGGTGCTG CTAATTTCGC AGGTCACTTA ACGATTGCTG ATAGGACTAC GGTTTCCGGA
AACACCTCAA TTATTCGATC CATTACAGAG CCGGGTCAGC ATTTCACGGG AGTGTACCCG
TCGATGCTCC ATGGTGCTTG GGAGAAAAAC GCTGCTATTT TGCGTGGACT AGATAAAATA
CGTCAGCGCT TGCGTTTATT GGATAAGAAC AAAAATTCAG GGTCTTAA
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| Protein sequence | MPTAIELAEQ FQASLVGEAP HGFTGLAPLE RAQSNQISFL SNLLYRQQAS ESAAGALIVS
QSDLDFLQAN PGANSVKRVY FVAKNPYTTF ARMAQYFAKA NDPIYASGIH PSAVIDSTAI
VPPSCHIGPF VQIGAGVKLG ERVSILGNSS IAKDSVIASD TLIYPSVSIY HNTQIGERCI
IHSGAVIGAD GFGFAPDFSA TGGEWVKIPQ TGRVVISNDV EIGASTTIDR GAMSDTVIGA
GTKIDNQVQI AHNVIVGSCC VIAGCAAISG STKIGNFCII GGAANFAGHL TIADRTTVSG
NTSIIRSITE PGQHFTGVYP SMLHGAWEKN AAILRGLDKI RQRLRLLDKN KNSGS
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