| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnec_0516 |
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| Symbol | |
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| ID | 6183149 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polynucleobacter necessarius subsp. necessarius STIR1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010531 |
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| Strand | + |
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| Start bp | 467635 |
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| End bp | 468162 |
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| Gene Length | 528 bp |
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| Protein Length | 175 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 641671197 |
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| Product | outer membrane chaperone Skp (OmpH) |
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| Protein accession | YP_001797393 |
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| Protein GI | 171463280 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG2825] Outer membrane protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 38 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 65 |
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| Fosmid unclonability p-value | 0.547662 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGCTTT ATCAATCTTC CAAATGGATA CAAGCGGGCC TATTTGCTGC AGTGACGGCT
TTAGTCGCCC CACAGGTTTT TGCTCAAGAT GCGGGCACCC GTGTTGCGGT TGTGAACTCT
GAGAAAGTAT TTAATGAGTC CAATCTTGCA AAAGCAATGC AAACCCGTTT GCAAAATGAA
TTTACGAAGC GTCAAAATGA TTTGCGCGAT AGCGCGCAAA GAATTAAGTC TGCGGCAGAA
AAGCTTGATC GTGACGCAGC CGTTATGAAT GAAGCTGAGC GTATTCGTCG TCAACGTGAG
TTGGCTGACC AAGATCGCGA ATTACAACGT AAGCAACGTG AGTTCACTGA AGATCTAAAT
CAGCGTACTT TTGAAGAACG TGCCAAGATC GCAGAAAAAG CAAACGCAGT GTTAAAGCAA
ATTGCTGAAC AGAGAAAAAT TGATGTCATT GTTCAAGAAG CAGCTTATGT CAGCCCAAAA
GCCGATGTAA CTGATGATGT CATCAAAACC TTGAATAGTC TTAAGTAA
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| Protein sequence | MKLYQSSKWI QAGLFAAVTA LVAPQVFAQD AGTRVAVVNS EKVFNESNLA KAMQTRLQNE
FTKRQNDLRD SAQRIKSAAE KLDRDAAVMN EAERIRRQRE LADQDRELQR KQREFTEDLN
QRTFEERAKI AEKANAVLKQ IAEQRKIDVI VQEAAYVSPK ADVTDDVIKT LNSLK
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