Gene Pnec_0509 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnec_0509 
SymbolpyrH 
ID6182934 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolynucleobacter necessarius subsp. necessarius STIR1 
KingdomBacteria 
Replicon accessionNC_010531 
Strand
Start bp460022 
End bp460732 
Gene Length711 bp 
Protein Length236 aa 
Translation table11 
GC content46% 
IMG OID641671190 
Producturidylate kinase 
Protein accessionYP_001797386 
Protein GI171463273 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0528] Uridylate kinase 
TIGRFAM ID[TIGR02075] uridylate kinase 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.00424433 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones63 
Fosmid unclonability p-value0.390175 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCAGCCT ACAAACGAGT CCTCCTAAAA CTATCTGGTG AAGCCCTTAT GGGTGATGAT 
GCTTTCGGCA TCAATCCAGT CACCATTGAT TCCATGGTTA GAGAAATTGC TGATGTTGTA
AATAGTGGGG TAGAGCTAGC AATTGTGATC GGTGGCGGAA ATATTTTCCG CGGTGTTGCG
GGTGGTGCTG CAGGTATGGA TCGAGCAACT GCTGATTACA TGGGTATGCT GGCAACCATG
ATGAACTCTT TAGCATTGCA AGATGCCTTG CGCCAAAAAG GCGTTGAAGC GCGCGTGCAA
TCCGCTCTTC GGATGGATCA AGTTGTTGAG CCCTATATTC GTCCACGTGC AATCCGTGCG
ATGAGTGAAG GCAAGGTAGT GATCTTTGCA GCCGGTACTG GTAATCCATT CTTTACTACC
GACACAGCAG CCGCTCTGCG TGGCGCTGAA ATGGGTGTTG AAGTAATGCT CAAAGCTACT
AAGGTAGACG GTATCTATAG CGCTGATCCA GTGAAAGATC CAACCGCTAC TTTATATAAA
ACGATTACGT TTGATGAAGC ATTAATCAAA AATCTACAGG TGATGGATGC AACCACATTT
GCTTTGTGTC GTGACCGCAA ATTACCAATT AAAGTATTTT CAATACTCAA GCCAGGCACA
TTAATGCGTG TAGTGCAAGG CGAGTCTGAA GGTACTTTGG TGCACGTTTA A
 
Protein sequence
MPAYKRVLLK LSGEALMGDD AFGINPVTID SMVREIADVV NSGVELAIVI GGGNIFRGVA 
GGAAGMDRAT ADYMGMLATM MNSLALQDAL RQKGVEARVQ SALRMDQVVE PYIRPRAIRA
MSEGKVVIFA AGTGNPFFTT DTAAALRGAE MGVEVMLKAT KVDGIYSADP VKDPTATLYK
TITFDEALIK NLQVMDATTF ALCRDRKLPI KVFSILKPGT LMRVVQGESE GTLVHV