Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pnec_0509 |
Symbol | pyrH |
ID | 6182934 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polynucleobacter necessarius subsp. necessarius STIR1 |
Kingdom | Bacteria |
Replicon accession | NC_010531 |
Strand | + |
Start bp | 460022 |
End bp | 460732 |
Gene Length | 711 bp |
Protein Length | 236 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 641671190 |
Product | uridylate kinase |
Protein accession | YP_001797386 |
Protein GI | 171463273 |
COG category | [F] Nucleotide transport and metabolism |
COG ID | [COG0528] Uridylate kinase |
TIGRFAM ID | [TIGR02075] uridylate kinase |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.00424433 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 63 |
Fosmid unclonability p-value | 0.390175 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCAGCCT ACAAACGAGT CCTCCTAAAA CTATCTGGTG AAGCCCTTAT GGGTGATGAT GCTTTCGGCA TCAATCCAGT CACCATTGAT TCCATGGTTA GAGAAATTGC TGATGTTGTA AATAGTGGGG TAGAGCTAGC AATTGTGATC GGTGGCGGAA ATATTTTCCG CGGTGTTGCG GGTGGTGCTG CAGGTATGGA TCGAGCAACT GCTGATTACA TGGGTATGCT GGCAACCATG ATGAACTCTT TAGCATTGCA AGATGCCTTG CGCCAAAAAG GCGTTGAAGC GCGCGTGCAA TCCGCTCTTC GGATGGATCA AGTTGTTGAG CCCTATATTC GTCCACGTGC AATCCGTGCG ATGAGTGAAG GCAAGGTAGT GATCTTTGCA GCCGGTACTG GTAATCCATT CTTTACTACC GACACAGCAG CCGCTCTGCG TGGCGCTGAA ATGGGTGTTG AAGTAATGCT CAAAGCTACT AAGGTAGACG GTATCTATAG CGCTGATCCA GTGAAAGATC CAACCGCTAC TTTATATAAA ACGATTACGT TTGATGAAGC ATTAATCAAA AATCTACAGG TGATGGATGC AACCACATTT GCTTTGTGTC GTGACCGCAA ATTACCAATT AAAGTATTTT CAATACTCAA GCCAGGCACA TTAATGCGTG TAGTGCAAGG CGAGTCTGAA GGTACTTTGG TGCACGTTTA A
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Protein sequence | MPAYKRVLLK LSGEALMGDD AFGINPVTID SMVREIADVV NSGVELAIVI GGGNIFRGVA GGAAGMDRAT ADYMGMLATM MNSLALQDAL RQKGVEARVQ SALRMDQVVE PYIRPRAIRA MSEGKVVIFA AGTGNPFFTT DTAAALRGAE MGVEVMLKAT KVDGIYSADP VKDPTATLYK TITFDEALIK NLQVMDATTF ALCRDRKLPI KVFSILKPGT LMRVVQGESE GTLVHV
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