| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnec_0508 |
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| Symbol | tsf |
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| ID | 6184573 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polynucleobacter necessarius subsp. necessarius STIR1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010531 |
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| Strand | + |
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| Start bp | 458951 |
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| End bp | 459835 |
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| Gene Length | 885 bp |
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| Protein Length | 294 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 641671189 |
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| Product | elongation factor Ts |
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| Protein accession | YP_001797385 |
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| Protein GI | 171463272 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0264] Translation elongation factor Ts |
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| TIGRFAM ID | [TIGR00116] translation elongation factor Ts |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.0459419 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 66 |
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| Fosmid unclonability p-value | 0.717587 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGTCGCTA TTACCGCTGC AATGGTTGGC GAGTTACGCG CCAAAACTGA TGCTCCGATG
ATGGAGTGTA AAAAGGCTTT GACTGAGGCT GATGGTGACA TGGCTCGTGC AGAAGAAATT
CTGCGCGTTA AGCTTGGCAG CAAAGCAGGA AAAGCGGCTT CTCGTGTAAC GGCCGAAGGT
ATTGTTGCTG CATCTATCAA CAGCACTACA GGCGCCTTGT TAGAAGTGAA CTGCGAAACC
GATTTCGTTT CTAAGAACGA TGACTTCTTG GCATTTGCAA ATGACTGCGT GAAGTTGGTT
GCTGAAAAGA ACCCGGCTGA CGTTGCTGCA TTGTTGGCAT TGCCATTAAA CGGCCAGACT
GTTGATGAAG TTCGTAGCGC ATTGATCGGT AAGATCGGTG AGAACATCAT GCCACGTCAT
TTCAAGCGTT TCGCTGGTAG CAATAAATTG GTTTCCTACC TCCACGGCAC TCGTATTGGT
GTAGTGGTTG AATTCGAGGG CGATGACACT GCTGCTAAAG ACGTTGCAAT GCACATTGCT
GCGATGAAGC CAGTGGCTTT GTCTATGGCT GACGTTCCAG CTGAAGCAAT CGCGGTTGAG
CGTAGCGTTG CGGTTCAAAA GGCGGCTGAA TCTGGTAAAC CACCAGAGAT CGTTGAAAAG
ATGGTCGAAG GTTCTATTCA GAAGTACCTC AAAGAGGTTT CTTTGTTGAA CCAGACTTTT
GTTAAAAACG ACAAGCAAAC TGTTGAGCAA ATGCTCAAGG CTGCAAATAC AACAATCAAG
GGCTTCACCA TGTTTGTTGT AGGCGAGGGT ATTGAGAAGC GTCAAGACGA CTTTGCGGCT
GAAGTGGCTG CACAAGTAGC TGCCGCATCT AAAGCAACTG CTTAA
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| Protein sequence | MVAITAAMVG ELRAKTDAPM MECKKALTEA DGDMARAEEI LRVKLGSKAG KAASRVTAEG
IVAASINSTT GALLEVNCET DFVSKNDDFL AFANDCVKLV AEKNPADVAA LLALPLNGQT
VDEVRSALIG KIGENIMPRH FKRFAGSNKL VSYLHGTRIG VVVEFEGDDT AAKDVAMHIA
AMKPVALSMA DVPAEAIAVE RSVAVQKAAE SGKPPEIVEK MVEGSIQKYL KEVSLLNQTF
VKNDKQTVEQ MLKAANTTIK GFTMFVVGEG IEKRQDDFAA EVAAQVAAAS KATA
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