| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnec_0497 |
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| Symbol | |
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| ID | 6184572 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polynucleobacter necessarius subsp. necessarius STIR1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010531 |
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| Strand | + |
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| Start bp | 442974 |
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| End bp | 444242 |
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| Gene Length | 1269 bp |
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| Protein Length | 422 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 641671179 |
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| Product | DNA repair protein RadA |
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| Protein accession | YP_001797375 |
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| Protein GI | 171463262 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG1066] Predicted ATP-dependent serine protease |
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| TIGRFAM ID | [TIGR00416] DNA repair protein RadA |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 76 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAAGAAG GTCTTCTGGA AACAACTTCC AATTCTCGTT TTCAGGGTTT GGCGCAATCG
TTGCCAAGAC AAAAGCTCTC TGCTATTGCT GCGGAAGATT TACCAAGGTT TAGTACGGGT
GTAGAGGAGT TTGATCGCGT GCTGGGTGGT GGCTTAGTTC CGGGCGGAGC AGTGCTCTTA
GGTGGTGACC CCGGTATTGG TAAATCAACT TTGCTATTGC AAGCACTTGC AGAGATGAGT
GCTGCCGGGA TGAATGTGCT TTATAGCAGC GGCGAAGAAT CGGCTGCCCA GATTGCATTG
CGTGCGAAGC GCATTGCATT AGATGCCCCC CAACTAGAAG TGTTGGCTGA AATTCGGTTA
GAGAAACTGA TTTCAATTAT GGACACCGTT AAGCCACAAG TATTAGTGGT GGATTCCATT
CAGACCTTGT ATTCAGAGGT TTTAAGTTCA GCCCCAGGCT CTGTTGCTCA AGTACGCGAG
TGCGCTGCGC AATTAACGAG AGCTGCTAAA TCAAGTGGCA TCTGCGTGCT GATGGTAGGG
CATGTGACCA AGGATGGTCA TCTGGCTGGT CCTAGAGTGT TAGAGCATAT TGTTGATACC
GTTTTGTATT TCGAAGGCGA TACCCATTCT TCTTTCCGCT TAGTGCGATC CATCAAGAAT
CGCTTTGGCG CTGTCAATGA GCTTGGTGTA TTCGCTATGA CAGAAAAAGG TTTGCGGGGA
GTAACCAACC CTTCGGCGAT TTTCTTGTCG CAACACGAAC AAATGGTTCC TGGTGCCTGT
GTATTGGTTA CGCAAGAAGG CAGCAGACCT TTGTTGGTGG AGATTCAGGC TCTGGTGGAT
ACCGCGCATG TGCCCAATCC TCGCCGCTTA GCAGTTGGCT TGGAACAAGC TCGTTTGGCA
ATGCTCTTGG CGGTGTTGCA TCGTCACGCT GGTGTTGCCT GTTTTGATCA AGATGTTTTC
TTAAATGCAG TTGGTGGCGT AAAGATATCC GAGCCGGCTG CTGACTTAGC TATATTGCTC
GCCATTCAAT CTTCTATTCG GAATCGCGCC TTGCCTAAAG AGTTAATCGT ATTTGGTGAA
GTTGGTTTGG CTGGAGAGAT TCGTCCTTGT CCACGCGGTC AGGAGCGCTT GAAAGAAGCT
GTTAAATTGG GCTTTACTCT AGCCATCATT CCAAAAGCCA ATATGCCTAA GACTAAGATT
CCAGGGGTGA AGGTAATTCC AGTGGAGCGA ATTGATCAGG CAATCGCGGC GGCTGCAGAG
TTAAGTTAA
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| Protein sequence | MEEGLLETTS NSRFQGLAQS LPRQKLSAIA AEDLPRFSTG VEEFDRVLGG GLVPGGAVLL
GGDPGIGKST LLLQALAEMS AAGMNVLYSS GEESAAQIAL RAKRIALDAP QLEVLAEIRL
EKLISIMDTV KPQVLVVDSI QTLYSEVLSS APGSVAQVRE CAAQLTRAAK SSGICVLMVG
HVTKDGHLAG PRVLEHIVDT VLYFEGDTHS SFRLVRSIKN RFGAVNELGV FAMTEKGLRG
VTNPSAIFLS QHEQMVPGAC VLVTQEGSRP LLVEIQALVD TAHVPNPRRL AVGLEQARLA
MLLAVLHRHA GVACFDQDVF LNAVGGVKIS EPAADLAILL AIQSSIRNRA LPKELIVFGE
VGLAGEIRPC PRGQERLKEA VKLGFTLAII PKANMPKTKI PGVKVIPVER IDQAIAAAAE
LS
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