| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnec_0468 |
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| Symbol | |
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| ID | 6183302 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polynucleobacter necessarius subsp. necessarius STIR1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010531 |
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| Strand | + |
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| Start bp | 417464 |
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| End bp | 418033 |
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| Gene Length | 570 bp |
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| Protein Length | 189 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 641671152 |
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| Product | transcriptional regulator, BadM/Rrf2 family |
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| Protein accession | YP_001797349 |
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| Protein GI | 171463236 |
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| COG category | [K] Transcription |
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| COG ID | [COG1959] Predicted transcriptional regulator |
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| TIGRFAM ID | [TIGR00738] rrf2 family protein (putative transcriptional regulator)
[TIGR02010] iron-sulfur cluster assembly transcription factor IscR |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.0000178548 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 83 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAGACTTA CAACTAAAGG TCGTTTTGCA GTAACCGCAA TGATTGATTT AGCTCTGCGT
GAAGCGCATG GCCCCGTAAC TTTGGCTGGA ATTAGCCAAA GACAAAAAAT TTCTCTTTCT
TATCTCGAGC AATTGTTTGG CAAACTACGC CGCTTCAATA TCGTAGAGAG CACTCGTGGT
CCTGGCGGTG GTTATACCCT GGCGCGACCT TCCTCTGAGG TGAGTGTTGC TGACATCATT
GTTGCAGTCG ATGAATCGCT CGACGCAACC CAATGCGGCG GCAAGGGCAA TTGTCATACT
GATGAAGAAA ATCATGGCCG TTGTATGACG CATGATCTTT GGAGCAACCT CAACTCTAAG
ATGGTTGAGT ACCTCAGCTC GGTAAGCTTA AAAGATTTGG TGCAACAACA AGAAGGACGC
GGCGTTGTCA TTCAAGATAT GCGCCAAAAG AAAATTAAGG TTGAAAGTTC TAAAGCGGAT
AAGCCTGCTC CTGCGCTTGT AGCTAAAAAA GAAGTTGTCC CCAAAGCACC ATTGGTGAAT
TCCGTATTCA ACTTGGCACG TCAGAGTTAA
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| Protein sequence | MRLTTKGRFA VTAMIDLALR EAHGPVTLAG ISQRQKISLS YLEQLFGKLR RFNIVESTRG
PGGGYTLARP SSEVSVADII VAVDESLDAT QCGGKGNCHT DEENHGRCMT HDLWSNLNSK
MVEYLSSVSL KDLVQQQEGR GVVIQDMRQK KIKVESSKAD KPAPALVAKK EVVPKAPLVN
SVFNLARQS
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