| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnec_0466 |
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| Symbol | |
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| ID | 6184390 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polynucleobacter necessarius subsp. necessarius STIR1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010531 |
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| Strand | - |
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| Start bp | 413812 |
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| End bp | 415011 |
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| Gene Length | 1200 bp |
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| Protein Length | 399 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 641671150 |
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| Product | aromatic amino acid aminotransferase |
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| Protein accession | YP_001797347 |
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| Protein GI | 171463234 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1448] Aspartate/tyrosine/aromatic aminotransferase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.00128744 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 76 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCCTGT TTGCCTCAGT CCAACTAGCC CCTAAAGATC CCATTTTTGG CCTCACAGAA
GCCTACGTTG CAGACCAACG CGCTGATAAA GTGAATTTAG GTGTTGGCGT GTATTACACC
GACGAAGGCA AGGTTCCATT ATTGAAGGCA GTAATCAAAG CGGAAGAGGC GATTGTTGCC
AAGCGCTCAC CGCGCAGCTA TATCCCAATC GAAGGACCCA ATCCTTACAA CAGTGCAGTG
CAAAACTTAT TGTTCGGTGC TGACTCCTCA CTCATTAAAG ATGGTCGTGT TGTAACTGCT
GAATGTCTTG GTGGCACTGG TGCTTTGCGC GTTGGCGCTG ACTTTATTAA ACGCCTTAAC
TTAAATGCAC CTTGTGCGAT TAGCAATCCC ACCTGGGAAA ACCATCGCGG CATTTTTGAA
TCTGCTGGCT TTGAAGTGGT TGAGTACACC TATTTCGATG GCAAAACTCG CGGCGTTGAT
TTTGATGGCA TGGTGAAGTC TTTAGAGTCT TTCCCAAAGA ACACCACTGT GTTGTTGCAC
GCTTGCTGCC ACAACCCAAC AGGCGCAGAT ATTGCTGAGG CGCAATGGCG TCAAGTGATT
GATATCTGCA AAAACAAAGG GCTAATTCCT TTCTTAGATA TGGCTTACCA AGGCTTTGCG
GCTGGGATTG AGCAGGACGG TGATGCAGTT CGCCTCTTCG CTGAATCAGG CATATCTTTC
TTTGTATCGA GCTCTTTCTC CAAGTCATTC TCACTCTATG GTGAACGTGT TGGAGCACTG
TCAATCGTGA CACAAAGCAA AGATGAATCC ACTCGCGTAC TCTCACAATT GAAACGTGTG
ATTCGTACTA ACTATTCCAA CCCCCCAACT CACGGCGCTG CAATTGCCGC TGCTGTTTTG
AATTCACCAG AATTACGTAA GCTCTGGGAA GACGGGTTGG CAGAAATGCG TGACCGCATT
AAAGCGATGC GTCATGGTCT AGTTGAAAAG CTCGCTGCTG CTGGTGTAAA GCAAGATTTT
GCTTTTATCG AAAAGCAACG TGGCATGTTT TCTTACTCAG GCTTAACAGC TGAGCAAGTT
GAGCGCTTAC AGAAAGAAGA TGGCATTTAT GCACTCTCTA CTGGACGCAT TTGTGTGGCA
GCTCTCAATA CTAAAAATAT TGATAAAGTC GCTAAAGCAA TCGCCCGCGT CTTAGCGTAA
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| Protein sequence | MTLFASVQLA PKDPIFGLTE AYVADQRADK VNLGVGVYYT DEGKVPLLKA VIKAEEAIVA
KRSPRSYIPI EGPNPYNSAV QNLLFGADSS LIKDGRVVTA ECLGGTGALR VGADFIKRLN
LNAPCAISNP TWENHRGIFE SAGFEVVEYT YFDGKTRGVD FDGMVKSLES FPKNTTVLLH
ACCHNPTGAD IAEAQWRQVI DICKNKGLIP FLDMAYQGFA AGIEQDGDAV RLFAESGISF
FVSSSFSKSF SLYGERVGAL SIVTQSKDES TRVLSQLKRV IRTNYSNPPT HGAAIAAAVL
NSPELRKLWE DGLAEMRDRI KAMRHGLVEK LAAAGVKQDF AFIEKQRGMF SYSGLTAEQV
ERLQKEDGIY ALSTGRICVA ALNTKNIDKV AKAIARVLA
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