| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnec_0463 |
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| Symbol | |
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| ID | 6184525 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polynucleobacter necessarius subsp. necessarius STIR1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010531 |
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| Strand | - |
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| Start bp | 411083 |
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| End bp | 411763 |
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| Gene Length | 681 bp |
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| Protein Length | 226 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 641671147 |
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| Product | endonuclease III |
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| Protein accession | YP_001797344 |
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| Protein GI | 171463231 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0177] Predicted EndoIII-related endonuclease |
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| TIGRFAM ID | [TIGR01083] endonuclease III |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.0687351 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 74 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGATGAATC TAGAAAAGCG ACGTGCTTTT TTTGAGCAAC TCAAAGCAAA TAATCCCAAG
CCAGAAACTG AGTTGGAATA TAGCTCGCCG TTTGAGTTGT TAATTGCAGT ATTGCTATCT
GCACAGGCAA CGGATGTATC AGTCAATAAA GGCACTCGCA AACTTTACAA GGTAGCCAAT
ACCCCGCAAG CCCTTTTAGA TTTGGGCGAA GAAGGAGTTA GGCCCTACAT TCAGCATATT
GGTTTATTTA ACTCCAAGGG AAAACATATT CAAGAGAGCT GTCGACTGCT CTTGGACAAG
CATGGTGGTG AAGTACCTCA GACTCGCGAG GAATTAGAGG CTCTTCCAGG TGTTGGCAGA
AAAACTGCGA ATGTCATTCT CAATACCGCT TTTGGCCAAC CAACTATCGC CGTTGATACT
CACATATTCA GAGTATCCAA CCGAACAGAT TTGGCGCCCG GCAAAGATGT CGTGAAAGTA
GAGGAGCAAC TACTCAAGCG CGTACCAAAA GAGTATCTGC ATAATGCCCA TCATTGGCTT
ATTCTGCATG GAAGATATAC CTGTAAAGCA CGCAATCCAG ATTGCGCACA ATGCATAGTA
GAACCGCTAT GCGGCTTCAA ACAAAAAAAC TGGCAAAGGA AAAGTCCGTG GCGATATTTA
ATCCAACACG TGAAGAAGTG A
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| Protein sequence | MMNLEKRRAF FEQLKANNPK PETELEYSSP FELLIAVLLS AQATDVSVNK GTRKLYKVAN
TPQALLDLGE EGVRPYIQHI GLFNSKGKHI QESCRLLLDK HGGEVPQTRE ELEALPGVGR
KTANVILNTA FGQPTIAVDT HIFRVSNRTD LAPGKDVVKV EEQLLKRVPK EYLHNAHHWL
ILHGRYTCKA RNPDCAQCIV EPLCGFKQKN WQRKSPWRYL IQHVKK
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