Gene Pnec_0452 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnec_0452 
Symbol 
ID6184501 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolynucleobacter necessarius subsp. necessarius STIR1 
KingdomBacteria 
Replicon accessionNC_010531 
Strand
Start bp402377 
End bp402631 
Gene Length255 bp 
Protein Length84 aa 
Translation table11 
GC content46% 
IMG OID641671139 
ProductExcinuclease ABC C subunit domain protein 
Protein accessionYP_001797336 
Protein GI171463223 
COG category[L] Replication, recombination and repair 
COG ID[COG2827] Predicted endonuclease containing a URI domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000000122957 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones69 
Fosmid unclonability p-value0.760356 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGACCTGGC TTGTTTACCT TCTTGAATGC GCTGATGGCT CGTATTATGC CGGCATTACA 
AACCACTTAG AACATCGCAT TGAAGCCCAT AATTCAGGAC AAGGTGCACG TTATACGAGA
TCACGCAGAC CAGTCATCCT CTTGGCAACC CAAGAGCATC CGGATAGATC GGAAGCCTCA
AAAGCAGAGG CAAAACTAAA GCGACTTCCA AGAGCGGAAA AATTGGCATT CTTTAAAGAC
AAAAACCACC CATGA
 
Protein sequence
MTWLVYLLEC ADGSYYAGIT NHLEHRIEAH NSGQGARYTR SRRPVILLAT QEHPDRSEAS 
KAEAKLKRLP RAEKLAFFKD KNHP