| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnec_0426 |
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| Symbol | |
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| ID | 6184219 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polynucleobacter necessarius subsp. necessarius STIR1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010531 |
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| Strand | - |
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| Start bp | 379664 |
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| End bp | 380383 |
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| Gene Length | 720 bp |
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| Protein Length | 239 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 641671118 |
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| Product | transcriptional repressor, LexA family |
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| Protein accession | YP_001797315 |
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| Protein GI | 171463202 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG1974] SOS-response transcriptional repressors (RecA-mediated autopeptidases) |
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| TIGRFAM ID | [TIGR00498] SOS regulatory protein LexA |
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Plasmid Coverage information |
| Num covering plasmid clones | 37 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 70 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGACATAA ACACAATCGA TTTTCCAGAG GAGCTGACTG CCCTCCCCAA ACTCACTCCA
CGTCAGAATG AGATTTTGGA GTTGATTACT AAAGCCATTG ATGAAAGCGG CTTACCGCCC
ACTCGCGCGG AGATTGCCAC TCAACTGGGT TTCGCATCCG CCAATGCAGC AGAAGAACAT
TTACGCACGT TAGCAAAAAA AGGGTATATC GAATTAACGC CTGGCACCTC GCGCGGCATT
CGTATTCCAC AAAGATTTAA TCAAACTCAC AACAGCAATA AATATCGCCA ACTGTCTTTA
CCGTCAGGTG CATTACAACA ACTCACACTG CCATTGATTG GACGAGTTGC TGCTGGCTCA
CCCATTATGG CAGTAGAGCA TATTGAAAAA CACGTTCCAA TTGACCCAAG TTTATTTAGC
AAAAGCGCCG ATTACTTGTT AAAAGTAAAA GGGATGAGCA TGCGCGATGC AGGTATTTTG
GATGGTGATT ATCTAGCCGT GAGAAAAACA ACTGAAGTTC GCAATGGCGA CATCGTCGTT
GCGCGCCTTG ATGATGAAGT GACAGTGAAG CGTTGGCAGC AAAAGAAAAC TGCAAATGGA
ATCGTTATTG AACTCCAAGC AGAAAACCCA GACTTCAAAA ATATTTTGGT AGATGATCGT
CAACCCAATT TTGCAGTTGA GGGCCAAGCG GTTGGTCTGA TCAGGGCTGA AGGGCTGTAA
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| Protein sequence | MDINTIDFPE ELTALPKLTP RQNEILELIT KAIDESGLPP TRAEIATQLG FASANAAEEH
LRTLAKKGYI ELTPGTSRGI RIPQRFNQTH NSNKYRQLSL PSGALQQLTL PLIGRVAAGS
PIMAVEHIEK HVPIDPSLFS KSADYLLKVK GMSMRDAGIL DGDYLAVRKT TEVRNGDIVV
ARLDDEVTVK RWQQKKTANG IVIELQAENP DFKNILVDDR QPNFAVEGQA VGLIRAEGL
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