Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pnec_0424 |
Symbol | |
ID | 6183940 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polynucleobacter necessarius subsp. necessarius STIR1 |
Kingdom | Bacteria |
Replicon accession | NC_010531 |
Strand | + |
Start bp | 378139 |
End bp | 378714 |
Gene Length | 576 bp |
Protein Length | 191 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 641671115 |
Product | CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase |
Protein accession | YP_001797314 |
Protein GI | 171463201 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG0558] Phosphatidylglycerophosphate synthase |
TIGRFAM ID | [TIGR00560] CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase |
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Plasmid Coverage information |
Num covering plasmid clones | 38 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 73 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCTTTCA ATTTACCTAT TGCCCTGACC TGGTTGCGCG TCACAGCTAT TCCACTGTTA GTGGCAATCT TTTATTTGCC AAATTCTTGG CTCACCCCAT TTGAAAAGAA TTTGATTGCG GCAATTATTT TTATCTCTGC TGCTATTACC GATTGGTTAG ATGGTTTTTT GGCGCGTCAT TTAAAACAAG AATCTGCATT TGGGCAGTTT TTAGACCCGG TCGCCGATAA GTTAATTGTT GCTGCCGCAT TATTGGTTCT TCTGAATATG GATCGCATGC AAGTTTGGGT GGCACTCATC ATTATTGGTA GAGAGATTAC GATCTCTGCG CTTAGAGAGT GGATGGCTTT GCTAGGTGCA GGAAAAAGTG TGGCGGTTCA CATGATTGGA AAGCTGAAAA CGACGGCGCA ATTAGTGGCT ATACCGTTTT TATTACTCAA TGACACCTTA TTTGGCTGGC TCAATTGTGC ACAAGTAGGT ACCTGGTTAA TTTGGATTGC CTCTTTTTTA ACGCTTTGGT CGATGTTTTA TTACATGAAA AAGGCTTTGC CGCAGTTGGT CGGAAAAATC GACTAG
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Protein sequence | MPFNLPIALT WLRVTAIPLL VAIFYLPNSW LTPFEKNLIA AIIFISAAIT DWLDGFLARH LKQESAFGQF LDPVADKLIV AAALLVLLNM DRMQVWVALI IIGREITISA LREWMALLGA GKSVAVHMIG KLKTTAQLVA IPFLLLNDTL FGWLNCAQVG TWLIWIASFL TLWSMFYYMK KALPQLVGKI D
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