| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnec_0415 |
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| Symbol | recO |
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| ID | 6183213 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polynucleobacter necessarius subsp. necessarius STIR1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010531 |
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| Strand | + |
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| Start bp | 370412 |
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| End bp | 371146 |
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| Gene Length | 735 bp |
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| Protein Length | 244 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 641671108 |
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| Product | DNA repair protein RecO |
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| Protein accession | YP_001797307 |
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| Protein GI | 171463194 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1381] Recombinational DNA repair protein (RecF pathway) |
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| TIGRFAM ID | [TIGR00613] DNA repair protein RecO |
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Plasmid Coverage information |
| Num covering plasmid clones | 46 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 79 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGCCTCGA TTCGTGTTGC TGACGAACCT GCTTTTGTAT TGCATAGTAT TCCCTATAAA
GAGACGAGCT TAATTCTGGA TGTCTTTACG CGGCAATATG GCCGCATGGC TTTAATTGCC
AAAGGTGCTA AGCGCCAACA CTCGACATTG CGCCCGGTTC TTCAACGTTT TCAGCCCCTA
TTGGTTTCAT GGAGCGGCAA ATCTGAGCTG CGAACCCTCA CTAAATCGGA GTGGGTGGGT
GGTATGCCAT CTTTGGTTGG TGATGCCTTG CTTTGTGGTT TTTATTTAAA TGAGCTACTC
GTGAAGTTTT TGGCGCGTGA AGATGATTAC GAAAAACTCT ACGATCGTTA CGCAGAAACA
ATTAATGCCT TATCTAATTT AGAGTTTGAG TCCAAGGGTC TGGAAGAAAT TCTGCGCCAA
TTTGAGTTGT CACTCTTGCA AGAGACGGGG TATGCTGCTG CTTTAGACCG TTGCGTGGAA
AACAATGAGG CGCCATTGGC TCAAGAGCAA TATGTTTATC AGCCAGAGCG TGGTGTGCGA
CCTGTGCAGG TGGATGACCC TGGGCATTGG CCGGTTCTGA CCGGAAAATC ACTCCTAGCC
ATAGCTATTA GTGATTTTTC TGATCCAGAG ACGCTTTCAG AGAGCAAGCA GTTGATGCGC
TTTCTGTTAG GTTTGCACTT GCAGGATCAG GTGCTGACGA CACGTCAAAT TTTGATTGAT
CTGAAGAAAA TCTAG
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| Protein sequence | MASIRVADEP AFVLHSIPYK ETSLILDVFT RQYGRMALIA KGAKRQHSTL RPVLQRFQPL
LVSWSGKSEL RTLTKSEWVG GMPSLVGDAL LCGFYLNELL VKFLAREDDY EKLYDRYAET
INALSNLEFE SKGLEEILRQ FELSLLQETG YAAALDRCVE NNEAPLAQEQ YVYQPERGVR
PVQVDDPGHW PVLTGKSLLA IAISDFSDPE TLSESKQLMR FLLGLHLQDQ VLTTRQILID
LKKI
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