| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnec_0413 |
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| Symbol | rnc |
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| ID | 6183999 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polynucleobacter necessarius subsp. necessarius STIR1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010531 |
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| Strand | + |
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| Start bp | 368677 |
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| End bp | 369468 |
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| Gene Length | 792 bp |
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| Protein Length | 263 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 641671106 |
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| Product | ribonuclease III |
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| Protein accession | YP_001797305 |
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| Protein GI | 171463192 |
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| COG category | [K] Transcription |
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| COG ID | [COG0571] dsRNA-specific ribonuclease |
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| TIGRFAM ID | [TIGR02191] ribonuclease III, bacterial |
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Plasmid Coverage information |
| Num covering plasmid clones | 35 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 84 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATGCGC GCGCCATTAT TGAAACTGGA CCGCTGCAAG AGCGCCTTGG CTACACCTTC
AAGAAGCCCG AATTACTAAA TCAAGCCTTA ACTCACCGCA GTCACAGCAA AAAGAATAAT
GAGCGTCTCG AGTTTCTGGG TGATTCTATT TTGAATTGCG TTGTAGCAGA AATGCTTTAC
GAACGTTACT CAGATTTAGA TGAGGGCGAC CTTTCTCGTG TGCGTGCAAA CTTAGTAAAG
CAGCAGGCCT TATATGAAAT TGCCCAAACT TTATCGTTAT CGGATTACTT GCGCTTAGGC
GAGGGCGAAT TAAAGAGTGG CGGCTTTCGT CGCCCTTCAA TCCTGGCCGA TACCCTAGAG
GCTGTCACTG GCGCGATTTT CCTAGATGGT GGCTTTGAGG CGGCTAAGAC AAGCTTACGT
AAGCTGTATT CCATCATTTT GGCGCACGTG GATCCAAAAA CTTTGGGCAA AGACGATAAA
ACGCTTCTAC AAGAATGTTT GCAGAGTTAT CAGTTGCCAT TGCCTGCCTA TAACGTTACC
GGCACTACTG GCGCTGCACA TAACCAGCAG TTTGAAGTGG AGTGCTTGAT CCCCAGTCAT
AAGGTGGCTG TAAAGGGTGA GGGCGCGTCG CGTCGTGCCG CTGAGCAAGC TGCAGCAAAG
TTGGCTTTGA TTGCCATGAT GAAAGCGTTG CCACAGGAAT CTCGCAAACC CAAGAAGACT
CGGTCGGCAA AAAAGAAAGC AGCAAAAAAA GAAATCACCG AAGAGCAGTT CAATCTTAAG
CTGAAGGGCT AA
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| Protein sequence | MNARAIIETG PLQERLGYTF KKPELLNQAL THRSHSKKNN ERLEFLGDSI LNCVVAEMLY
ERYSDLDEGD LSRVRANLVK QQALYEIAQT LSLSDYLRLG EGELKSGGFR RPSILADTLE
AVTGAIFLDG GFEAAKTSLR KLYSIILAHV DPKTLGKDDK TLLQECLQSY QLPLPAYNVT
GTTGAAHNQQ FEVECLIPSH KVAVKGEGAS RRAAEQAAAK LALIAMMKAL PQESRKPKKT
RSAKKKAAKK EITEEQFNLK LKG
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