| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnec_0409 |
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| Symbol | |
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| ID | 6184263 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polynucleobacter necessarius subsp. necessarius STIR1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010531 |
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| Strand | + |
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| Start bp | 363177 |
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| End bp | 364424 |
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| Gene Length | 1248 bp |
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| Protein Length | 415 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 641671102 |
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| Product | 3-oxoacyl-(acyl carrier protein) synthase II |
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| Protein accession | YP_001797301 |
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| Protein GI | 171463188 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG0304] 3-oxoacyl-(acyl-carrier-protein) synthase |
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| TIGRFAM ID | [TIGR03150] beta-ketoacyl-acyl-carrier-protein synthase II |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 0.678663 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 80 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGTCAGCAT CAAATGGCCG ACGCCGGGTA GTAGTCACCG GCCTTGGCCT CATTTCACCT
GTTGGTAATT CAGTTGATGT AGCTTGGTCT AATTTGCTCG CGAGCAAATC AGGCATTGCC
ACCATCACCA AGTTTGACCA CACTCTGCTT AATGTTCATT TCGCTGGAGA GGTGAAAGAT
TTCAATGTCG AAGAATATGT TTCCGCTAAA GAAGCGCGTC ATATGGATAC TTTTATCCAT
TACGGTATCG CTGCTGGCAC GCAAGCTATT CGCGACAGTG GTTTAGAGAT CACAGAACAA
AACGCCGAGC GCGTTGGTGT GATGGTGGGT TCCGGTATCG GCGGCCTGCC AATGATTGAG
GAAACCGGCG CAGAGCTCTT GGCTCGTGGC CCTCGTCGTA TTTCACCATT CTTTGTTCCA
GGCTCGATCA TCAATATGAT TTCTGGCCAC CTCAGTATTT TGTTTGGCCT TAAAGGCCCA
AACGTTGCTG CGGTAACGGC CTGCACAACC GGTTTGCATA GTATTGGTTT AGCTGCTCGC
TTAATTCAGT ACGGCGATGT TGATGTGATG GTTGCTGGCG GCGCTGAATC AACCATCTCC
GCTTTGGGCG TTGGTGGGTT TGCTTCTGCA AGAGCGCTCT CTACTCGTAA TGATGATCCT
GCTACTGCGT CGCGCCCTTG GGATAAAGAC CGTGATGGTT TTGTTCTCGG TGAAGGTGCT
GGTGTTGTCG TGCTTGAAGA GTATGAGCAT GCAAAAGCAC GTGGCGCAAA AATTTATTGC
GAGCTACTTG GCTTCGGTAT GAGTGGTGAC GCGTATCACA TGACTGCCCC AAATATGGAC
GGTCCACGTC GTTGCATGGT CAACGCAATG CGCGATGCCA AACTCAATCC AGACCAAATT
CAGTATTTGA ATGCCCATGG AACTTCCACG CCTCTGGGTG ATAAGAATGA AACTGAGGCG
ATTAAGGCGG CTTTGGGCGA TCACGCTAAA AAGGCTTTAA TTAACTCCAC TAAGTCGATG
ACTGGCCATC TTTTGGGCGG CGCTGGCGGC CTGGAATCTG TATTTACTAT TCTGGCCCTT
CATAACCAGA AATCGCCACC TACTATCAAC ATCTTCAATC AAGACCCTGA GTGTGATTTG
GACTACTGCG CTAATATCGC TAGGGATGTG AAGATCGATC ATGCAGTCAA AAACAATTTT
GGCTTTGGGG GTACTAACGG TACCTTGATT TTTGGCAAAC TGACCTAA
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| Protein sequence | MSASNGRRRV VVTGLGLISP VGNSVDVAWS NLLASKSGIA TITKFDHTLL NVHFAGEVKD
FNVEEYVSAK EARHMDTFIH YGIAAGTQAI RDSGLEITEQ NAERVGVMVG SGIGGLPMIE
ETGAELLARG PRRISPFFVP GSIINMISGH LSILFGLKGP NVAAVTACTT GLHSIGLAAR
LIQYGDVDVM VAGGAESTIS ALGVGGFASA RALSTRNDDP ATASRPWDKD RDGFVLGEGA
GVVVLEEYEH AKARGAKIYC ELLGFGMSGD AYHMTAPNMD GPRRCMVNAM RDAKLNPDQI
QYLNAHGTST PLGDKNETEA IKAALGDHAK KALINSTKSM TGHLLGGAGG LESVFTILAL
HNQKSPPTIN IFNQDPECDL DYCANIARDV KIDHAVKNNF GFGGTNGTLI FGKLT
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