Gene Pnec_0390 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnec_0390 
Symbol 
ID6183706 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolynucleobacter necessarius subsp. necessarius STIR1 
KingdomBacteria 
Replicon accessionNC_010531 
Strand
Start bp346793 
End bp347116 
Gene Length324 bp 
Protein Length107 aa 
Translation table11 
GC content41% 
IMG OID641671085 
Product4Fe-4S ferredoxin iron-sulfur binding domain protein 
Protein accessionYP_001797284 
Protein GI171463171 
COG category[C] Energy production and conversion 
COG ID[COG1146] Ferredoxin 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value0.997665 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones77 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTTACG TTGTTACCGA ATCTTGTATC CGCTGTAAAT ACACTGACTG TGTTGATGTT 
TGCCCAGTTG ACTGTTTTCG CGAAGGACCT AATTTTTTAG TCATCGATCC AGACGAATGT
ATCGATTGTG CGGTTTGCGT TCCTGAGTGT CCAGTAAATG CTATTTATGC CGAAGATGAT
GTTCCTGGCG ATCAACAGTC ATTTATCAAA CTGAATGCAG AACTATCTCC TTCATGGACT
TCTATCACCA AGTCCAAAGC AGCTCTTCCT GATGCCGAAG AGTGGAAAGA CGTTAAAAAC
AAACTTGATC AGCTAGTAAA GTAA
 
Protein sequence
MTYVVTESCI RCKYTDCVDV CPVDCFREGP NFLVIDPDEC IDCAVCVPEC PVNAIYAEDD 
VPGDQQSFIK LNAELSPSWT SITKSKAALP DAEEWKDVKN KLDQLVK