| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnec_0332 |
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| Symbol | |
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| ID | 6184473 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polynucleobacter necessarius subsp. necessarius STIR1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010531 |
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| Strand | + |
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| Start bp | 294439 |
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| End bp | 295533 |
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| Gene Length | 1095 bp |
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| Protein Length | 364 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 641671039 |
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| Product | CDP-glucose 4,6-dehydratase |
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| Protein accession | YP_001797238 |
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| Protein GI | 171463125 |
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| COG category | [G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0451] Nucleoside-diphosphate-sugar epimerases |
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| TIGRFAM ID | [TIGR02622] CDP-glucose 4,6-dehydratase |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.106161 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 68 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGACTGAGT CTAGTACATC AGTAAATCCA TTGTTTTGGA AGGGTAAGCG CGTCTTTTTG
ACTGGCTATA CTGGCTTTAA GGGTGGGTGG TTGTCTTTAT GGCTTGCGTC GATGGGGGCA
AAAGTAACGG GTTATGCTTT AGCTCCCAAT ACAGCACCCA ATTTTTTCGA GGTCGCAAAA
GTTCATTCTG ATTTAGAGTG CTCCCATATC GCTGATATAC GTGATTTAGA AAACCTACAA
AAAGCGATCA CTGCCGCTAA GCCAGAAATT GTTATACATA TGGCAGCTCA GCCATTAGTG
AAGTATTCCT ACATCAACCC AGTTGAAACA TATCAAACCA ATGTCATGGG AACTGTTCAT
GTCTTGGAGT CAATTCGTGT TTTAGATTGT GTTCGTGCTG TAGTGGTGGT AACTACGGAC
AAGTGTTATG AGAACAAAGA GTGGCCATGG GGTTATCGAG AGAATGAGCC CATGGGTGGT
CATGACCCAT ATAGTAATAG CAAGGGGTGC GCTGAGTTGG TGACAGACGC CTATCGTCAA
TCGTTTTTTT CTTCCGAAAG GTTTGATGAT CATCGCGTTG CAATTGCTTC AGCTCGTGCG
GGTAATGTTG TTGGAGGGGG TGATTGGTCG GAAGATCGCT TGGTCCCAGA TGCTATTAAA
GCTTTTGAAG CAAAGCAATC TTTGTTAATT CGGAATCCTT TGGCGACGCG GCCTTGGCAG
CATGTTTTGG AGCCTTTATC TGGCTATTTG GTTTTGGCGC AAGCTCTTTA TGAAAAAGGT
ATTCAATTTA ATGGTGGATG GAACTTTGGC CCCAAGGATG AAGACGCGCG ACCTGTCCAA
GAAGTGATCA ATTTGTTAAT AAAGCATTGG GGTGGCGGCG CCAATTGGAT TCAGGACATT
GGTGAGCAGC CTCATGAAGC GCATTCCCTA AAGCTAGATT GTTCGAAAGC AAGACAGTAT
TTAAATTGGG TGCCGAGATG GGGTTTGGAA GAAGCAATAG AACAGATTGC AAATTGGCAA
AGAGGATTTC AAGGAAATAT GGATATGCAC GCTCTTTCAT TGAGGCAAAT TAGCATATAC
ACAAAAAATA TCTAG
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| Protein sequence | MTESSTSVNP LFWKGKRVFL TGYTGFKGGW LSLWLASMGA KVTGYALAPN TAPNFFEVAK
VHSDLECSHI ADIRDLENLQ KAITAAKPEI VIHMAAQPLV KYSYINPVET YQTNVMGTVH
VLESIRVLDC VRAVVVVTTD KCYENKEWPW GYRENEPMGG HDPYSNSKGC AELVTDAYRQ
SFFSSERFDD HRVAIASARA GNVVGGGDWS EDRLVPDAIK AFEAKQSLLI RNPLATRPWQ
HVLEPLSGYL VLAQALYEKG IQFNGGWNFG PKDEDARPVQ EVINLLIKHW GGGANWIQDI
GEQPHEAHSL KLDCSKARQY LNWVPRWGLE EAIEQIANWQ RGFQGNMDMH ALSLRQISIY
TKNI
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