| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnec_0330 |
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| Symbol | |
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| ID | 6184111 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polynucleobacter necessarius subsp. necessarius STIR1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010531 |
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| Strand | + |
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| Start bp | 292044 |
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| End bp | 293519 |
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| Gene Length | 1476 bp |
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| Protein Length | 491 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 641671037 |
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| Product | mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase |
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| Protein accession | YP_001797236 |
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| Protein GI | 171463123 |
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| COG category | [G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0662] Mannose-6-phosphate isomerase
[COG0836] Mannose-1-phosphate guanylyltransferase |
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| TIGRFAM ID | [TIGR01479] mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.00801876 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 71 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCTCTAG TGATTCCTGT CATCCTTTGC GGTGGATCCG GCACTCGGCT TTGGCCCTTG
TCTCGTTCTG GCTTCCCAAA GCAATTTTTA GTGTTGTCAG GTGATGGCCC TTCCCAAAGT
CTTTTTCAGC AAGCGGTAGA GAGAATTAAC TCCATTGCTA ACTCGGATAT TCAGCTTGGT
AATACCTTGG TTTTAACTAA TGAAGATCAT CGATTTTTGG TGTTGGATCA ATTACGTGAA
TTGCCATCCA TAAATGCAAC GCTATTGCTT GAACCTGTTG GACGCAATAC AGCGCCTGCA
CTCGCTATGG CAGCGCTTTG TGCGCAGCAA CTTGCAAATG GCGTAGATCC GATTTTGGTG
ATTACCCCAG CAGATCAAAC CATTAAAAAT CAAGGTGCAT TTACCAAAGC GCTGCAAGAC
TGTATTCGCT CCGTCGAGGG TGCACCAAAC TCCATCGCCA TTTTAGGAAT TACACCGACC
GCTCCAGAGA CCGGTTACGG ATATATACAG CGCGCTGATA GTAAAGATGC CAATAATGCT
TATGAGGTCA AACGCTTTGT AGAAAAGCCT GATAGTAAGA CTGCAGAGGG CTATCTAGCA
GAGGGTTCTT ATCTATGGAA TAGTGGCATG TTTGTTTTGA AGGCAAGCAC TTGGTTGACT
AGCTTAAAAG AATTTCGTCC AGACATTGAA GAAGCTGCAC AAAAAGCCTG GCAGAAAAAA
ACTGAAGATG CTTCTGGTGG GGTGAGTTTT ATTCGCCCTG GAAAAGTAGA GTTCGAAGCC
ATTCCGAGTG AATCAATTGA CTATGCAATC ATTGAAAAAT GCCCCCAATC GAATTTCCCA
ATCAAGATGG TGGAGCTTAA TGCCGGTTGG AATGATCTGG GTGCTTGGGA TGCAGTCTGG
CAGGTTGGCA AGCGGGATGA AAATGGCAAT GTAACAAGCG GCGATACATT ACTTGCGAAT
ACAAAAAACT CTTTAGTGCA TGCCAATAGC CGCCTAGTAA GCGCCGTCGG TATTGAAAAC
TTAGTCATTG TGGAAACTGC TGATGCGGTA TTGGTCGCTA ATCGTGACAA CAGCCAAGAT
GTTAAAAACA TTGTTAGACA ACTAGAGACG CAAGAGCGTG AAGAAAAAAA TTTACATCGC
AAAGTTTCTA GACCATGGGG ATGGTATGAT AGTGTAGATG AGGGTGAGCA TTTTAAGGTG
AAACGTATTC GGGTTAAGCC TGGTGCGCGC CTATCACTGC AAATGCACCA ACATCGAGCA
GAGCACTGGG TTGTGGTCAA GGGTGTGGCA GAGATTACCA ATGGCGACCA AGTCATCACC
TTAAAGGAGA ACCAGAGCAC TTATATTCCG CCTGGACAGA CTCACCGCTT GGTCAACCCT
GGACCAGACC CTCTGGAGAT TATTGAGGTC CAGTCGGGTT GCTATTTGGG GGAAGATGAT
ATTGTGCGTT TTGAGGATAG TTATGGGCGA AGTTAG
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| Protein sequence | MALVIPVILC GGSGTRLWPL SRSGFPKQFL VLSGDGPSQS LFQQAVERIN SIANSDIQLG
NTLVLTNEDH RFLVLDQLRE LPSINATLLL EPVGRNTAPA LAMAALCAQQ LANGVDPILV
ITPADQTIKN QGAFTKALQD CIRSVEGAPN SIAILGITPT APETGYGYIQ RADSKDANNA
YEVKRFVEKP DSKTAEGYLA EGSYLWNSGM FVLKASTWLT SLKEFRPDIE EAAQKAWQKK
TEDASGGVSF IRPGKVEFEA IPSESIDYAI IEKCPQSNFP IKMVELNAGW NDLGAWDAVW
QVGKRDENGN VTSGDTLLAN TKNSLVHANS RLVSAVGIEN LVIVETADAV LVANRDNSQD
VKNIVRQLET QEREEKNLHR KVSRPWGWYD SVDEGEHFKV KRIRVKPGAR LSLQMHQHRA
EHWVVVKGVA EITNGDQVIT LKENQSTYIP PGQTHRLVNP GPDPLEIIEV QSGCYLGEDD
IVRFEDSYGR S
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