Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pnec_0291 |
Symbol | ribH |
ID | 6184112 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polynucleobacter necessarius subsp. necessarius STIR1 |
Kingdom | Bacteria |
Replicon accession | NC_010531 |
Strand | - |
Start bp | 264953 |
End bp | 265468 |
Gene Length | 516 bp |
Protein Length | 171 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 641670999 |
Product | 6,7-dimethyl-8-ribityllumazine synthase |
Protein accession | YP_001797198 |
Protein GI | 171463085 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG0054] Riboflavin synthase beta-chain |
TIGRFAM ID | [TIGR00114] 6,7-dimethyl-8-ribityllumazine synthase |
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Plasmid Coverage information |
Num covering plasmid clones | 41 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 93 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACTAACT CTACCAGTGA TTTTGTAGGC GTATTAGAAG CCGATTTAAA TGGGCAAGAT CTCCGCATTG GCATTGTGCA AGCGCGTTTT AATGAAGACC ATTGCGTTGC CTTAACGAGT GCCTGTATTA ATGAATTGCT TTCTTTAGGC GTCACCCAAT CAGACATCAA ACTTGTGACC GTGCCAGGAG CTTTAGAGAT TTCATTTGCC CTCCAAAAAA TGGCTGAGAC CGGTGAATTT GATGGCTTGA TTGCATTAGG CGCTGTTATT CGTGGCGAGA CCTATCACTT TGAACTAGTC TCCAATGAAT CTGCTGCTAG CATTACTCGT ATTTCGATTG ACTCTGGATT ACCGATTGCC AATGGTGTAC TCACATGCGA TACCGATGAG CAAGCTAACG CTCGCGTTCA AGTAAAAGGT GCTGAGTGTG CACAGGCCGT AGTGGAGATG GCAAATTTAG CCCTGGCCTT AACCCCTGAT ATCGATATCG AAATCAACGC GAGTGAAGAA GAATAA
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Protein sequence | MTNSTSDFVG VLEADLNGQD LRIGIVQARF NEDHCVALTS ACINELLSLG VTQSDIKLVT VPGALEISFA LQKMAETGEF DGLIALGAVI RGETYHFELV SNESAASITR ISIDSGLPIA NGVLTCDTDE QANARVQVKG AECAQAVVEM ANLALALTPD IDIEINASEE E
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