Gene Pnec_0291 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnec_0291 
SymbolribH 
ID6184112 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolynucleobacter necessarius subsp. necessarius STIR1 
KingdomBacteria 
Replicon accessionNC_010531 
Strand
Start bp264953 
End bp265468 
Gene Length516 bp 
Protein Length171 aa 
Translation table11 
GC content45% 
IMG OID641670999 
Product6,7-dimethyl-8-ribityllumazine synthase 
Protein accessionYP_001797198 
Protein GI171463085 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0054] Riboflavin synthase beta-chain 
TIGRFAM ID[TIGR00114] 6,7-dimethyl-8-ribityllumazine synthase 


Plasmid Coverage information

Num covering plasmid clones41 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones93 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTAACT CTACCAGTGA TTTTGTAGGC GTATTAGAAG CCGATTTAAA TGGGCAAGAT 
CTCCGCATTG GCATTGTGCA AGCGCGTTTT AATGAAGACC ATTGCGTTGC CTTAACGAGT
GCCTGTATTA ATGAATTGCT TTCTTTAGGC GTCACCCAAT CAGACATCAA ACTTGTGACC
GTGCCAGGAG CTTTAGAGAT TTCATTTGCC CTCCAAAAAA TGGCTGAGAC CGGTGAATTT
GATGGCTTGA TTGCATTAGG CGCTGTTATT CGTGGCGAGA CCTATCACTT TGAACTAGTC
TCCAATGAAT CTGCTGCTAG CATTACTCGT ATTTCGATTG ACTCTGGATT ACCGATTGCC
AATGGTGTAC TCACATGCGA TACCGATGAG CAAGCTAACG CTCGCGTTCA AGTAAAAGGT
GCTGAGTGTG CACAGGCCGT AGTGGAGATG GCAAATTTAG CCCTGGCCTT AACCCCTGAT
ATCGATATCG AAATCAACGC GAGTGAAGAA GAATAA
 
Protein sequence
MTNSTSDFVG VLEADLNGQD LRIGIVQARF NEDHCVALTS ACINELLSLG VTQSDIKLVT 
VPGALEISFA LQKMAETGEF DGLIALGAVI RGETYHFELV SNESAASITR ISIDSGLPIA
NGVLTCDTDE QANARVQVKG AECAQAVVEM ANLALALTPD IDIEINASEE E