| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnec_0263 |
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| Symbol | |
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| ID | 6184171 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polynucleobacter necessarius subsp. necessarius STIR1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010531 |
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| Strand | - |
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| Start bp | 242190 |
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| End bp | 243662 |
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| Gene Length | 1473 bp |
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| Protein Length | 490 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 641670973 |
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| Product | Deoxyribodipyrimidine photo-lyase |
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| Protein accession | YP_001797172 |
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| Protein GI | 171463059 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0415] Deoxyribodipyrimidine photolyase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 34 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 88 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAAAAAG CACTTGTTTG GCTCCGCCGT GATCTTCGTC TCTATGACAA TTCGGCCCTT
CACCATGCCC TCAAGGAAAG TAGGCAAGTT TGGCTAGCCT TCATTTTTGA CACCGAGATT
CTTAAACCTC TTCTAAGGGG TAAGCTGGAT GCCAATGGCC TTAAGCATGA TCGCCGCGTC
GACTTCATTT GGCAGGGCAT TAAACAAATT GATGATCAGC TTCGCGCCCA AGGCGGTGGA
CTGATTGTGC GTTTTAGTAA CCCCACTGAA TGTATTCCTC AACTAGCTTC AGAACTTGGT
GTCAATGCAG TTTTTGCTAA CCATGACTAT GAGCCTTCCG CTATCGAACG CGATGAAGTG
GTTACAGCCA AATTAGAAAA GGAAGGTATT GAGTTTCTGA CATTTAAAGA TCAAGTAATC
TTTGAGAAAA AAGAAATTTT GACCAATTCA AATACTGTTT TTTCTATCTT TACACCCTAT
AAAAATAATT GGTTTAAGAC GCTACAAGAA AAAGATCTTG CTGCTTACGA ATGCAATCCA
AAACCAGGAC AGCTTGCAGC AATCCCCAAG AAAATATCCA AGCCACTACC ATCTTTAGAG
TCTATGGGCT TTTGCCCTAC TGGCATTGAG AGCTACCTGC CGCCTGGCTC AGAGGGCGGC
CAAGCATTTT TAGAAGACTT TTTGACTCGC ATTGATCAAT ACCAAATTAG TAGAGACTTT
CCTGCAATTA AAGGAGTTAG TTATCTATCA ACCCATTTAC GTTTTGGCAT GCTATCGATT
CGAGGTTTAG TACGTGAAGC CCATCGCCGC ATGTTGGCAG GTAGCATGGG TGCAACGATT
TGGCTAAGCG AACTGATCTG GCGTGATTTT TATTTCATGA TTCTGGCCAA TCACCCCCGT
CTTGCTAAAG GCGCATCTTT TAAGCCCGAT TACGACAATA TTGTTTGGGA GAGCGGCGCT
ACCGCCAAGA AATTATTTAC CGCTTGGTGT GAAGGCAAGA CCGGTTATCC ACTGGTGGAT
GCAGCAATGC ATCAACTCAA TCAAAGTGGC TATATGCATA ATCGTTTGCG CATGGTTGTT
GCGAGCTTTC TGACGAAAGA TTTGGGCATA GATTGGCGCT GGGGTGAAGC CTATTTTGCC
GAACATCTGA ATGACTTTGA GTTATCTTCA AATAATGGTG GCTGGCAATG GGTCTCTTCA
TCCGGGTGCG ATGCCCAGCC CTATTTCCGG ATCTTTAACC CTATTACTCA ATCAGAAAAG
TTTGACCCTG AGGGCAAGTT CATCAAACGC TACCTTCCAC AACTAGAAAA GCTCTCCAAG
AAATCGGTTC ATACCCCTTG GAAGGCAGGT CATATAGAGC TAGAGGCAGC TGGAATCAGT
CTGGATAAAG ATTACCCACT ACCAGTGGTG GATCACGACG AAGCTCGCAA GAAGACTCTA
GTGCGCTATA GCGTTGTGAA AAAAATCACC TAA
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| Protein sequence | MQKALVWLRR DLRLYDNSAL HHALKESRQV WLAFIFDTEI LKPLLRGKLD ANGLKHDRRV
DFIWQGIKQI DDQLRAQGGG LIVRFSNPTE CIPQLASELG VNAVFANHDY EPSAIERDEV
VTAKLEKEGI EFLTFKDQVI FEKKEILTNS NTVFSIFTPY KNNWFKTLQE KDLAAYECNP
KPGQLAAIPK KISKPLPSLE SMGFCPTGIE SYLPPGSEGG QAFLEDFLTR IDQYQISRDF
PAIKGVSYLS THLRFGMLSI RGLVREAHRR MLAGSMGATI WLSELIWRDF YFMILANHPR
LAKGASFKPD YDNIVWESGA TAKKLFTAWC EGKTGYPLVD AAMHQLNQSG YMHNRLRMVV
ASFLTKDLGI DWRWGEAYFA EHLNDFELSS NNGGWQWVSS SGCDAQPYFR IFNPITQSEK
FDPEGKFIKR YLPQLEKLSK KSVHTPWKAG HIELEAAGIS LDKDYPLPVV DHDEARKKTL
VRYSVVKKIT
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