| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnec_0262 |
|---|
| Symbol | apaH |
|---|
| ID | 6184289 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Polynucleobacter necessarius subsp. necessarius STIR1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010531 |
|---|
| Strand | - |
|---|
| Start bp | 241311 |
|---|
| End bp | 242150 |
|---|
| Gene Length | 840 bp |
|---|
| Protein Length | 279 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 46% |
|---|
| IMG OID | 641670972 |
|---|
| Product | diadenosine tetraphosphatase |
|---|
| Protein accession | YP_001797171 |
|---|
| Protein GI | 171463058 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG0639] Diadenosine tetraphosphatase and related serine/threonine protein phosphatases |
|---|
| TIGRFAM ID | [TIGR00668] bis(5'-nucleosyl)-tetraphosphatase (symmetrical) |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 39 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 89 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCAAGA TCTATGCCAT CGGCGATGTC CAAGGCTGCG CACCTTCGTT AAAAGCCTTA
GTTAAAAAGC TTCCACCAAA ATCCAAAATG ATTTTTCTGG GAGACTTAGT GAATCGTGGA
CCCGATTCAT TAGGCGCATT ACGTCATTTA AAAACCCTGC AAGAATCTGG TCGTGCTGAG
TGCATCTTGG GCAATCATGA CTTACATCTT CTAGCAATTG ATGCTGATCT CCGTAAAACC
AAAGGGCTTG ATACCGTTGA ACCTATCCTG CATGCTCCAG ATCGCGCAGA ACTAATCAAT
TGGATTCGGA ATCGTCCGAT GGCACTGAGC AATGGCAAGG TACTTACTGT GCATGCGGGA
GTCTTGCCGC AATGGGATTT ACAACAAACG ATTGAATGCG CTCAAGAAGT AGAGAAGGCA
TTGCGTAGCA AGTCTTACAA AACTTTTTTA GCCAATATGT ATGGCAATTC CCCAGCTAAA
TGGACTAACT CCCTCAAGGG GTATGAGCGC TTGCGCGTGA TTACCAATAC ATTAACCCGG
ATGCGCTTTT GCAGCCCTAC CGGTCAAATG GAGTTTGAGA GCAAAGAAGG CTTGGAGGAT
GGTCCTAAGG GCTATACCCC TTGGTTTATG GCACCCAATC GTAAAACAGC TGACACCTTA
ATTTACTTTG GGCACTGGTC CACTCTGGGT TTGCTACGTA AACACAATGT GATTGGCCTT
GATACTGGCT GCGTCTGGGG CGGAAAACTG ACTGCTCTTG AGATTTCTAA ATCGAATAAA
GACAGCAAAA AATTAGACGT CATTCAAGCG GCTGGCTATG ACCATCCACT CAGAATGTAA
|
|---|
| Protein sequence | MSKIYAIGDV QGCAPSLKAL VKKLPPKSKM IFLGDLVNRG PDSLGALRHL KTLQESGRAE
CILGNHDLHL LAIDADLRKT KGLDTVEPIL HAPDRAELIN WIRNRPMALS NGKVLTVHAG
VLPQWDLQQT IECAQEVEKA LRSKSYKTFL ANMYGNSPAK WTNSLKGYER LRVITNTLTR
MRFCSPTGQM EFESKEGLED GPKGYTPWFM APNRKTADTL IYFGHWSTLG LLRKHNVIGL
DTGCVWGGKL TALEISKSNK DSKKLDVIQA AGYDHPLRM
|
|---|
| |