| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnec_0234 |
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| Symbol | |
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| ID | 6184115 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polynucleobacter necessarius subsp. necessarius STIR1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010531 |
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| Strand | + |
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| Start bp | 212314 |
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| End bp | 213720 |
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| Gene Length | 1407 bp |
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| Protein Length | 468 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 641670946 |
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| Product | UDP-N-acetylmuramate |
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| Protein accession | YP_001797145 |
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| Protein GI | 171463032 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0773] UDP-N-acetylmuramate-alanine ligase |
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| TIGRFAM ID | [TIGR01081] UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase |
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Plasmid Coverage information |
| Num covering plasmid clones | 34 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 73 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCATATAC ATATCTTGGG CATTTGCGGT ACTTTCATGG GCGGCATTGC CGCAATCGCC
AGACAAGCCG GGCACCGCGT AACTGGTTGC GATGCCAACG TGTATCCACC AATGAGTACG
CAGCTTCAAG CTCAAGGCAT CGAACTGATT GAGGGATTTT CACCTGATCA ATTATCTCAG
TTTGAGACCA TGCCTGATTT ATTCGTGATT GGCAATGTGG TTTCTCGCGG CAATCCTTTA
ATGGAGGCGA TTCTCAATCA AGGACTGCCT TATATTTCTG GTCCGCAATG GTTGGGCGAA
CAAGTTTTAT ATGGAAAGCA TGTGCTGGCG GTTGCTGGCA CGCATGGCAA GACCACAACC
TCGGCGATGC TGACTTGGAT TTTAGAATTC AATGGCTATA AGCCTGGATA TTTAATTGGC
GGTGTGCCGC TCAATTTCAC AGTCTCTGCA TACTTGGGTG AGAGTAAATA TTTCGTGATT
GAGGCTGATG AATACGACAC AGCGTTTTTT GATAAGCGTA GTAAGTTTGT TCACTATCGA
CCACGTACTG CTTTATTAAA TAATTTAGAG TTTGACCATG CCGATATTTT TGCTGATCTT
GCTGCAATCG AAACACAATT TCACCATTTA GTGCGTACAG TTCCGGGTGA TGGCTTGCTG
GTAGTCAATG GTGAGGAGCC AGCATTAGCA AGTGTTATTA CACGCGGTGC TTGGGCTCCT
GTCGAGCGCT TCGGCCAAGA GTCTGTTAAT GAATGGTCTT TGATTTCTCA AGAAGCAGAT
GGCTTTATTG TGCGCAAATC TGGCAAAGAA GTAGCAACAG TAAAGTGGGC GCCTGATTCT
GGCGTGATGG GTCGACACAA TCAGCTAAAT GCTCTTGCGG CGATTGCCTC TGCTAATCAC
ATTGGAATCT CCCCGGCAGA TTCTGCGTTT GCCTTGGTAG AGTTCAAGAA TGTGAAACGT
CGTCTGGAGA CAATTGGCGT TGCAAATGAT GTCACGATCT ACGATGACTT TGCGCATCAC
CCAACTGCAA TCACTACTAC GGTTGATGGC TTGCGTCGTC GTGTTGGTAA TGCGCGCATC
TTGGCGGTGC TCGAGCCACG TTCAAACACA ATGAAGCTTG GCGTGATGAA GGCCCAGCTT
CCTAGCAGTC TTGAGGCTGC CGATAAGGTA TTTGCGTATA GTGCAAACTC TGGCAAAGAA
TCTCTAGGAT GGGATTTGGC TGAGGTCTTA TCTCCACTTA ACCAACAAGA GCAGTGGAAA
GCACATGCTT TTGACGATCT AGAGCTCCTA GTGAAAGCAG TTGCGCTAGA AGCAAAGCCG
GGCGATCACA TTTTGGTAAT GAGTAATGGC GGGTTTGGCG GCGTCCATCA AAAAATATTA
AAAGCCATCT CAGCACAGCA GAAATAA
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| Protein sequence | MHIHILGICG TFMGGIAAIA RQAGHRVTGC DANVYPPMST QLQAQGIELI EGFSPDQLSQ
FETMPDLFVI GNVVSRGNPL MEAILNQGLP YISGPQWLGE QVLYGKHVLA VAGTHGKTTT
SAMLTWILEF NGYKPGYLIG GVPLNFTVSA YLGESKYFVI EADEYDTAFF DKRSKFVHYR
PRTALLNNLE FDHADIFADL AAIETQFHHL VRTVPGDGLL VVNGEEPALA SVITRGAWAP
VERFGQESVN EWSLISQEAD GFIVRKSGKE VATVKWAPDS GVMGRHNQLN ALAAIASANH
IGISPADSAF ALVEFKNVKR RLETIGVAND VTIYDDFAHH PTAITTTVDG LRRRVGNARI
LAVLEPRSNT MKLGVMKAQL PSSLEAADKV FAYSANSGKE SLGWDLAEVL SPLNQQEQWK
AHAFDDLELL VKAVALEAKP GDHILVMSNG GFGGVHQKIL KAISAQQK
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