| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnec_0231 |
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| Symbol | |
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| ID | 6184262 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polynucleobacter necessarius subsp. necessarius STIR1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010531 |
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| Strand | - |
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| Start bp | 211060 |
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| End bp | 211509 |
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| Gene Length | 450 bp |
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| Protein Length | 149 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 641670943 |
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| Product | 3-dehydroquinate dehydratase |
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| Protein accession | YP_001797142 |
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| Protein GI | 171463029 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0757] 3-dehydroquinate dehydratase II |
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| TIGRFAM ID | [TIGR01088] 3-dehydroquinate dehydratase, type II |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 0.447722 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 80 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGTCGAAAA AGGCTTCAAT TCTCGTAATT CAAGGTCCAA ACCTAAATCT ATTAGGCAGC
CGTGAGTCCG ATGTTTACGG CAAGACGACC CTAGAAGACA TTCATCAAAA GCTGGGTGAA
CTGGCAACAG CGCAGTCTGT TGATCTGAGC ACCTATCAAA GCAATCATGA AGGCGAGCTG
ATTGATCGCA TTCAAAAAGC TAAACAGGAT GGGGTTGATT TCATCATCAT TAACCCAGGC
GCCTTTACCC ACACCAGTGT TGCCTTGCGT GACGTATTAG CTGGCGTAGC CATCCCCTTT
ACTGAAGTCC ATTTATCCAA TATTCATCAG CGTGAAGAAT TCCGCAAACA CTCCTATTTG
TCCGATATCG CGACAGGAGT TATTTGCGGA CTTGGCGCGA TTGGCTATGA ATTAGCACTA
CAAGCAGCGA TTACTCGCAT AAAGAAGTAA
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| Protein sequence | MSKKASILVI QGPNLNLLGS RESDVYGKTT LEDIHQKLGE LATAQSVDLS TYQSNHEGEL
IDRIQKAKQD GVDFIIINPG AFTHTSVALR DVLAGVAIPF TEVHLSNIHQ REEFRKHSYL
SDIATGVICG LGAIGYELAL QAAITRIKK
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