| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnec_0222 |
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| Symbol | |
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| ID | 6184440 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polynucleobacter necessarius subsp. necessarius STIR1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010531 |
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| Strand | + |
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| Start bp | 201606 |
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| End bp | 204578 |
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| Gene Length | 2973 bp |
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| Protein Length | 990 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 641670934 |
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| Product | ribonucleotide-diphosphate reductase subunit alpha |
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| Protein accession | YP_001797133 |
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| Protein GI | 171463020 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG0209] Ribonucleotide reductase, alpha subunit
[COG1328] Oxygen-sensitive ribonucleoside-triphosphate reductase |
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| TIGRFAM ID | [TIGR02506] ribonucleoside-diphosphate reductase, alpha subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.000088492 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 63 |
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| Fosmid unclonability p-value | 0.91407 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACATACG CTAATCCACA AACAGCAGGC CAACCAACTG GTGCTAATAA CCCAGGGATG
AGTCCTGCAG GGGTCATTAA TCAAGTCCCT TCTGCCGGTT TTGTTGCCGG TGGTGTTGGT
GGTACTCAGG CAACCCAATT GTCTGATTAC AAAATCATTC GCCGCAACGG TTCAGTCGTT
GCTTTTGAAC CATCCAAAAT TGCTATTGCT GTAACTAAGG CATTTTTAGC GGTTAATGGT
GGTCAAGGGG CTGCATCTGC ACGTGTTCGC GAGCAAGTTG AGCAACTGAC TCACTCTGTT
GTGCGCGCAT TGTTGCGTAG CCGTCCAAAC GGTGGCACTT TCCATATTGA AGACATTCAA
GACCAGGTTG AGCTGGCTTT GATGCGTAGC GGTGAGCACA ACGTTGCCCG GGCGTATGTT
CTCTATCGCG AAAAGCGTAA TCAAGAACGT GCCGCTCAGC AAGAAGTTTC ACAAGAAGTG
CAAACCGCAA ATCAGGCAGG CGAGTCTGGT ATCAAGGTGA CTGATAACGG CGTAGAGAAG
TGGCTTGATA TGGCCGCTTT GCGCACTGTG ATGGAGGCTG CTTGCGAAGG ATTGGGTACC
CATATTGATG CGTCTCCAAT CGTGACTGAA ACTATTAAGA ATTTGTACGA CGGCGTACCA
ATGGCTCAGG TTTATGACTC AGCGATCTTG GCTTCACGTA CTTTGATTGA AAAAGATCCT
GCTTATAGCC AAGTAACTGC GCGTATCTTG ATGCACGTGA TTCATAAAGA AATCTTGGGC
AAAGAAGTAT TGCAAGGGGA TATGCAAGCT GAGTACAGCA CATATTTTGC TAAGTACATC
AACGAAGGTA TTTCTGCTGA GTTGTTAGAT CCACGTATGC GTGAGTTTGA TTTGCCACGT
TTGGCCGCAG CCTTGAATGC TAGCCGTGAC TTGCAGTTTA ACTACCTCGG TTTGCAAACT
TTGTACGACC GTTATTTCTT GCACATTGAA GATCGTCGCA TTGAAATGCC ACAGGCTTTC
TTCATGCGCG TAGCAATGGG CTTGTCTTTG AATGAGTTGG ATCGTGAGCG TCGCGCAATT
GAGTTCTATG AAATCCTCTC CACATTTGAT TTCATGTCCA GCACCCCAAC ATTGTTTAAT
TCAGCAACAA CTCGTCCACA GCTCTCTAGC TGCTATTTGA CGACAGTTGA AGATGACCTC
GATGGCATCT ATGAAGCATT GAAAGAAAAT GCATTGTTAT CTAAGTTTGC CGGTGGTTTG
GGTAATGATT GGACCAATGT TCGCGCCTTA GGTAGCCATA TCAAAGGCAC AAATGGTAAG
TCTCAAGGCG TCGTGCCATT TTTGAAAGTG GTGAACGACA CTGCAGTTGC TGTGAACCAA
GGCGGCAAGC GTAAGGGTGC GGTTTGCGCC TACTTGGAAA CATGGCATTT AGATATCGAA
GAGTTTTTGG AGTTGCGCAA AAACACTGGC GACGACCGTC GTCGTACACA TGACATGAGC
ACCTCTAACT GGATTCCGGA CTTGTTTATG AAGCGCGTAA TGGAAAACGG TGAATGGACT
TTGTTCTCAC CATCCAATAC TCCTGACTTG CATGGCAAAT TTGGTAAGGC TTTTGAAGAG
GCGTATGTAG CCTATGAGCA AAAGGCTGAT CGTGGTGAAT TGAAGCCATT CCGTAGAATC
CCAGCGCAGC AATTGTGGCG CAAGATGCTC GGTATGTTGT TTGAAACTGG CCACCCATGG
ATCACATTTA AAGATCCTTG CAATATTCGT AGTCCGCAAC AGCATATCGG CGTAGTTCAC
TCCTCTAATT TGTGTACCGA GATCACTCTC AATACCAATG AGGACGAAAT TGCAGTTTGC
AACCTGGGTT CTGTGAACTT AACTGCTCAC ATGACTACAG ACGCTAATGG CAAGATGATT
TTGGATCACG AGAAGCTCCA AAGAACCGTC CGCACTGCAA TGCGCATGTT GGATAACGTG
ATTGATATCA ACTACTACGC AGTTGCCAAA GCACGTAATT CAAACTTAAA GCATCGTCCG
GTCGGCATGG GCATCATGGG CTTCCAGGAT TGTTTGCATA TGCAACGCAT TCCTTACGCA
AGTGATGAGG CTGTAAAGTT TGCGGACTCC TCAATGGAAG CGGTTTGCTA CTACGCTTAC
CAAGCGTCCA ATGAATTGGC TGAAGAGCGT GGTGTTTACA GCACTTATAA GGGTTCTTTG
TGGGATCGCG GCATCCTCCC GCAGGATTCA GTAGCTCTCT TGGCGGCTGA GCGTGGCGGT
TATTTGGAAG TAGATAGCTC ATCCACAATG GATTGGAACG GATTGCGTGC TCGCATTAAG
CAATACGGTA TGCGCAACTC CAATTGCGTG GCTATTGCGC CAACAGCAAC GATTTCTAAC
ATCATTGGCG TGTCAGCTTG TATCGAGCCA ACATTCCAGA ATTTGTTCGT GAAATCCAAT
CTTTCTGGCG AATTCACGGT AGTCAACGAG TATTTAGTGC GTGATTTGAA AGATCGCGGG
CTTTGGGATG AGGTCATGAT TGCCGACTTG AAGTACTTTG ACGGCACTTT GTCTAAGATC
GATCGCATTC CACAAGATTT GCGTGATTTG TATGCAACAG CCTTTGAGGT TGATCCAACC
TGGTTGGTTG AGGCAGCCTC ACGTCGTCAA AAATGGATTG ACCAAGCTCA GTCACTCAAT
ATCTATATGG CTGGCGCTTC TGGCAAGAAA CTGGACGATA CCTACAAGTT GGCTTGGTTG
CGCGGCTTGA AGACAACATA TTACCTCCGC ACAATGGCTG CAACTCATGT GGAGAAATCG
ACTGTTGCTA GCGGTCAGTT GAACGCAGTT TCCAGTGGTG GTGGCGTCAA CGGTACTGAT
GCAGCTGCTG CCGGTGGAGT TGAGGCTGAT GGCCCAGTTT GCACAATGCG CCCAGGTGAT
GCTGGTTTCG AAGAATGTGA AGCTTGCCAA TAA
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| Protein sequence | MTYANPQTAG QPTGANNPGM SPAGVINQVP SAGFVAGGVG GTQATQLSDY KIIRRNGSVV
AFEPSKIAIA VTKAFLAVNG GQGAASARVR EQVEQLTHSV VRALLRSRPN GGTFHIEDIQ
DQVELALMRS GEHNVARAYV LYREKRNQER AAQQEVSQEV QTANQAGESG IKVTDNGVEK
WLDMAALRTV MEAACEGLGT HIDASPIVTE TIKNLYDGVP MAQVYDSAIL ASRTLIEKDP
AYSQVTARIL MHVIHKEILG KEVLQGDMQA EYSTYFAKYI NEGISAELLD PRMREFDLPR
LAAALNASRD LQFNYLGLQT LYDRYFLHIE DRRIEMPQAF FMRVAMGLSL NELDRERRAI
EFYEILSTFD FMSSTPTLFN SATTRPQLSS CYLTTVEDDL DGIYEALKEN ALLSKFAGGL
GNDWTNVRAL GSHIKGTNGK SQGVVPFLKV VNDTAVAVNQ GGKRKGAVCA YLETWHLDIE
EFLELRKNTG DDRRRTHDMS TSNWIPDLFM KRVMENGEWT LFSPSNTPDL HGKFGKAFEE
AYVAYEQKAD RGELKPFRRI PAQQLWRKML GMLFETGHPW ITFKDPCNIR SPQQHIGVVH
SSNLCTEITL NTNEDEIAVC NLGSVNLTAH MTTDANGKMI LDHEKLQRTV RTAMRMLDNV
IDINYYAVAK ARNSNLKHRP VGMGIMGFQD CLHMQRIPYA SDEAVKFADS SMEAVCYYAY
QASNELAEER GVYSTYKGSL WDRGILPQDS VALLAAERGG YLEVDSSSTM DWNGLRARIK
QYGMRNSNCV AIAPTATISN IIGVSACIEP TFQNLFVKSN LSGEFTVVNE YLVRDLKDRG
LWDEVMIADL KYFDGTLSKI DRIPQDLRDL YATAFEVDPT WLVEAASRRQ KWIDQAQSLN
IYMAGASGKK LDDTYKLAWL RGLKTTYYLR TMAATHVEKS TVASGQLNAV SSGGGVNGTD
AAAAGGVEAD GPVCTMRPGD AGFEECEACQ
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