| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnec_0188 |
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| Symbol | lpxC |
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| ID | 6184523 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polynucleobacter necessarius subsp. necessarius STIR1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010531 |
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| Strand | + |
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| Start bp | 169669 |
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| End bp | 170583 |
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| Gene Length | 915 bp |
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| Protein Length | 304 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 641670908 |
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| Product | UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase |
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| Protein accession | YP_001797107 |
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| Protein GI | 171462994 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0774] UDP-3-O-acyl-N-acetylglucosamine deacetylase |
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| TIGRFAM ID | [TIGR00325] UDP-3-0-acyl N-acetylglucosamine deacetylase |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.000244021 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 65 |
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| Fosmid unclonability p-value | 0.627239 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGATGAAGC AACGCACTAT CGCGACTCCG GTAAAAACCG TGGGGATTGG CTTGCACTCT
GGCCGCAAGG TGACGATTTC TATTAAGCCT GCGCCAGTGA ATTCAGGGGT TCAATTTATT
AGGGTGGATA CACCCGAGCG GTCAGTGGTT CCCGCAACTG CTTTAGCTGT TTGTGACACA
AGACTGGCTT CAGTTATTCA AAAAGATGGT GTGCGAGTTT CTACTGTTGA GCATTTGTTA
TCAGCTTGTG CTGGGTTAGG CTTGGATAAT TTATTAATCG AGCTTGATGG TGAAGAAGTG
CCCATCATGG ATGGTAGTGC TGCTTCATTT TTGTTTTTGA TTGAATCAGC GGGCATTGCC
GAGCAAGAGG TACCACGTCA ATTTGTCGTT ATTAAAAAAC CAGTTGAAGT TCGGGAAGGC
GACAAGCTTG CACGATTAGA GCCGTTCTTT GGATTTAAGT TGGACTTTAC GATTGACTTT
AAACATCCCG CTGTTGATAA AACAGGCCAA CGTTTTGTAG TGGATTTTTC TGAGCATGCC
TACCGCAGTG AAATTGGCCG TGCGCGTACT TTTGGATTTG CTCATGAAGT AGAGGCGCTC
CGCGAAATGG GTTTAGCTCG TGGCGGCAGC TTAGATAACG CAATTGTTTT AGATGAGCAC
CGCATTTTGA ATAACGAAGA ACTTCGTTAC GAAGATGAAT TTGTGCGTCA CAAAATCTTA
GATGCGATTG GCGACCTTTA TCTCATCGGT CATCCAATTG TGGGTGCTTA TGTTGCTGAG
AAGTCAGGTC ATGCCCTCAA TAACGCACTT TTACGCAAAC TTTTGGAAGA TCCAAGTTCT
TACGAAATCA GTACCTTTGC GGAAAATAAG GCTCCAGGAG CCTATTCTCA AGAAAGTCAG
CCCCTCTTTT TCTAG
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| Protein sequence | MMKQRTIATP VKTVGIGLHS GRKVTISIKP APVNSGVQFI RVDTPERSVV PATALAVCDT
RLASVIQKDG VRVSTVEHLL SACAGLGLDN LLIELDGEEV PIMDGSAASF LFLIESAGIA
EQEVPRQFVV IKKPVEVREG DKLARLEPFF GFKLDFTIDF KHPAVDKTGQ RFVVDFSEHA
YRSEIGRART FGFAHEVEAL REMGLARGGS LDNAIVLDEH RILNNEELRY EDEFVRHKIL
DAIGDLYLIG HPIVGAYVAE KSGHALNNAL LRKLLEDPSS YEISTFAENK APGAYSQESQ
PLFF
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