Gene Pnec_0186 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnec_0186 
Symbol 
ID6182989 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolynucleobacter necessarius subsp. necessarius STIR1 
KingdomBacteria 
Replicon accessionNC_010531 
Strand
Start bp167672 
End bp169012 
Gene Length1341 bp 
Protein Length446 aa 
Translation table11 
GC content47% 
IMG OID641670906 
Productcell division protein FtsZ 
Protein accessionYP_001797105 
Protein GI171462992 
COG category[D] Cell cycle control, cell division, chromosome partitioning 
COG ID[COG0206] Cell division GTPase 
TIGRFAM ID[TIGR00065] cell division protein FtsZ 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000000000103682 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones62 
Fosmid unclonability p-value0.437906 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAATTTG AAATGTTAGA TCAAGAAACA GCTGGCAAGA CCATTATTAA AGTGGTTGGT 
GTCGGTGGCG CTGGTGGTAA TGCTGTCCAG CACATGATCC GTCGTGGTGT GAACGGCGTA
GAGTTCATTT GCATGAACAC CGATGCTGGC GCTTTACAGC GTTCTGAGGC ATCTGTGAAT
TTGCAACTGG GCTCTAGCGG ATTGGGTGCA GGGGCTAAAC CAGAAATCGG TGCAGCGTCT
GCTGAAGAAG TACGCGCACG TATTGCAGAT ACATTGCAAG GTGCGCACAT GGTGTTCATC
ACTGCCGGTA TGGGTGGTGG TACTGGTACT GGCGCAGCTC CAATCGTTGC TCAAGTAGCA
AAAGAAATGG GCATCCTTAC TGTTGGCGTA ATCAGTAAGC CATTTGATTT TGAGGGCGTA
AAGCGCTTGA AAGTTGCTGA AAACGGCGCA GCAGAACTTG AGTCTTATGT GGATTCACTC
ATTGTTGTTC TCAATGAAAA ACTCTTTGAA GTTATGGGTG AAGATGCTGA GTTTGATAAG
GCATTTGCGT GTGCGGATGA TGTATTACAC AACGCCGTAT CTGGCATTGC AGAAATTATC
AATGTTCAAG GTTTAATTAA CGTTGACTTT GAAGACGTTA AAACCGTAAT GGGTGAGCAA
GGTAAAGCCA TGATGGGAAC AGCCACTGTT TCTGGCATGG ATCGTGCTCG CTTGGCTGCT
GAGGCTGCGG TGGCATCACC ATTGTTAGAG GGTGTTGATC TTTCAGGTGC ACGCGGTATA
TTGGTAAATA TTACTGCTAG TCGTTCATTG AAGTTGTCTG AGACTCGCGA AGTAATGGCT
GCGATTCGTG GCTACGCTGC GGATGATGCA ACAGTTATCT TTGGTACTGT GTATGACGAG
AGTTTATGTG ATGCCTTGCG TGTGACTGTT GTGGCTACTG GTTTGAATAA TCCTCAGGCA
CATAAAAATA ACCAGCCTGA AGTAGTTTGG AGACAAGCTA CTGGTACTCA TGATGCAATG
CCAACGATGG CAGATCTCAA TAGCTTTGCT CTTGCAAGCC CATCGGCTGC AATAAGTAAA
GTAAGCATGG ATTCTGCTTT GGGAACTAGT GCAGGTTTGG CTATGACAGG TGCTGGTAGT
GCTCCAGCAA GGGCAGCTCA GCCAGCAAGC ACCAGCGTTG ATTACAGCCA ATATGATTTA
CCACGTGTTT TTCGTAGCTC TCGTGAAGCG ACTCCTGCGC CTACATTAGG TGCAGATAGC
TCTCCTCAGG CTAAATCCAT GTTGGACAAA GGGACTGATT ATTATGAAAT CCCAGCCTTT
TTGCGTAAGC AAGCAGATTA A
 
Protein sequence
MEFEMLDQET AGKTIIKVVG VGGAGGNAVQ HMIRRGVNGV EFICMNTDAG ALQRSEASVN 
LQLGSSGLGA GAKPEIGAAS AEEVRARIAD TLQGAHMVFI TAGMGGGTGT GAAPIVAQVA
KEMGILTVGV ISKPFDFEGV KRLKVAENGA AELESYVDSL IVVLNEKLFE VMGEDAEFDK
AFACADDVLH NAVSGIAEII NVQGLINVDF EDVKTVMGEQ GKAMMGTATV SGMDRARLAA
EAAVASPLLE GVDLSGARGI LVNITASRSL KLSETREVMA AIRGYAADDA TVIFGTVYDE
SLCDALRVTV VATGLNNPQA HKNNQPEVVW RQATGTHDAM PTMADLNSFA LASPSAAISK
VSMDSALGTS AGLAMTGAGS APARAAQPAS TSVDYSQYDL PRVFRSSREA TPAPTLGADS
SPQAKSMLDK GTDYYEIPAF LRKQAD